Pseudomonas stutzeri T13, B319_RS0106660
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri T13 contig000013, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGCTTCGGCAGCAGATGCTGCATCGGTTCTACGCTGATCACCACGGCTGGTTGAATGGCTGGCTGCGCCGTCAGCTCGGCTGTAGTCAGCGTGCGGCCG ACCTCGCGCAGGACACCTTCGTGCGGGTGCTGAGCAAAGACGACGACATGGCTGCGATCCGCGAACCCCGGGCCTATCTGCACACCATCGCCAAGGGCCT GTTGATCAACCATTGGCGCCGCCGGCAGATCGAGCAGGCCTATCTGGATGCATTGGCACTGCAACCGGAGCCGGTGGCACCGTCGCCGGAGTCCCAGGCG CTGATTGTCGAAACCCTGCTGCGGATCGATGCCATGCTGGCGCAGCTGCCCACCAGGGTGCGCAGCGCTTTCCTCATGTCGCAGCTGCACGGCATGACCT ACGCGGCTATCGCCACCGAACTGGGCGTATCCGAGCGCATGGTGAAGAAGTACATGGCGCAGGCCATGCTGCATTGCCTGATGCTGGTAGCGGAGGACTG
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| DNA Sequence for Gene |
>B319_RS0106660
ATGGGCAGCGACTACCGCGTGTTGCAGCAGGCTGCCGAATGGTTCGCCCTGCTGCAGTCCGGCTCGGTCAGCGCCAGCGAGCGCCGCGCGTGGGCGGCAT GGCTGGAGCAGCCGGAACACGCCCAGGCGTGGGCGAAGGTCGAGCGCATCAGCGGCCAGTTTCAGCCGCTGACCAGCGACGCCATCGGCCGAGCCGCCGG GGCCATGCTGCAGCAACGGCAGTCGACACGGCGGCAGGCGTTGAAGGTGCTCTCGGTGCTCTGCGGTGGCGCAGTCCTGACTGTCGCCGGCGGTGCGCTG CCCTGGCAGCGTTGGGCGGCCGATGAGCGCACCGCCGTCGGTGAGGTTCGTGATCTGCGCCTGGCCGATGGCACCCGGTTATGGCTGAACACCGACTCGG CGCTGGATATCCGCTTCGACGCGAAGGAACGAAGGCTGGCGCTGCAGCATGGCGAACTGCTGATCGACGCGCCCGCCAGCCGGCGCGGACGACCATTGGT GTTGAGCAGTCGCGAGGGGTATGTGCGCAGCGAGCAGGCCGCGCGCTTTTCGCTGCGCCAGGAGGAAGGGCGCACGCGTCTCAGCGTGTTCGCTGGCGTC GTGGACATTCAACTCGAGGGTTTCGGCGTGACCAGCGTGCCTGCCGGTCAGCAGGCTGCGTTCGACCGTCGCCATGTCGGGCCGCTGGGTGCTGCGCGCG CCGAGCACCAGGCTTGGGCGACCGGGGTGCTGCTGGCCGACAACCAGCGTCTCGAGGACTTCCTCGCCGAACTGTCGCGCTATCGCCACGGCTACCTCGG TTGCGATCCACGGATCGCCGATCTGCGTGTGGTCGGGGCGTTCCCGCTGGCCGATACCGACCGTGTACTGCGAGCCCTTGCCGCTACGTTGCCTGTGCGC ATCGAGCGGCGCATGGCCTGGTGGGTCAGCCTGGAACCGTTACCCAAGCAGGCAGGCGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAACGCTTACGCGAATAGAAAATATTCGCATCCGCAGTTCCCTTTCCGGATTTTCGCCGGGCATAGGACGAAACCCGTCATTCGAACAGGACTTCCCA TGCGCTCGACCGCCTTGCCCTTCCTTCCCGACCGTTCCCGTGCCCTGGCGCTGGGTATCCGCGCCGCGCTGCTGTGCCTGCCCCTGAGCATCGCCCCCGG CCTGGCCATCGCCCAGTCGACGACGCAGCAGGCGGTGCGCAGCTACGATATCCCCGCAGGCACGCTGTCCAGCGCGTTGAGCCGCTTTGCCGGCGAAGCG GGCGTGTTGCTGTCGGTTGACGGCAGCCTGGTGCAGGGCCTGGAAAGCAACGGGCTTAAGGGTCAGTACGGCGTCGATGAAGGTTTCGCCGCACTGCTGC AGGGCAGCGGTCTGCAGGCCGTGCGTGATGGCCAGGGCAACTATTCGCTGACTCGCCGCAGCGCGCAGAGCGATGCCGTCGAGCTGCAACCGATGACCGT
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| Amino Acid Sequence |
>membrane protein
MGSDYRVLQQAAEWFALLQSGSVSASERRAWAAWLEQPEHAQAWAKVERISGQFQPLTSDAIGRAAGAMLQQRQSTRRQALKVLSVLCGGAVLTVAGGAL PWQRWAADERTAVGEVRDLRLADGTRLWLNTDSALDIRFDAKERRLALQHGELLIDAPASRRGRPLVLSSREGYVRSEQAARFSLRQEEGRTRLSVFAGV VDIQLEGFGVTSVPAGQQAAFDRRHVGPLGAARAEHQAWATGVLLADNQRLEDFLAELSRYRHGYLGCDPRIADLRVVGAFPLADTDRVLRALAATLPVR IERRMAWWVSLEPLPKQAGV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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