Pseudomonas stutzeri T13, B319_RS0103870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri T13 contig000006, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCAGCAGATCGAAGACCCGCGCACCCTGTACGAAAAGCCGTTGAACACCTTCGTCGCCAACTTTCTCGGCGAAAACAACCGCCTGCCTGCGCACCTGCT GGAGCGGCGTGGCGAGAGCTGCACGGTCAAGCTCGGTCGCGGCGAAACCGTCGAGGCGCTGGCGGTCAATGTCGGTGCGACGGGGTCGCCGGTCAGCCTG TCGATCCGTCCGGAGCGGGTGCTGCTCAACGGTGCCAGTGCCAGCTGCCCGAACCGCTTCACCGGGCGCGTTGCCGAGTTCATCTACCTGGGCGACCACA TCCGCATCCGTCTCGAGGTCTGCGGCGTCAGTGATTTCTTCGTCAAGCAGCCGATCGCCGAGTTCGACCAAGCCCTGCGCGTGGGCGACGTGGTGCCGAT CGGCTGGCACGTCGAGCACGTCCGGGCGCTCGACCCGCTGCAGGCGGCCTGAGCCACTCCCGCAGCAACCCCAAACAACTGCATCAAGGAGCGAACTGTC
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| DNA Sequence for Gene |
>B319_RS0103870
ATGAGCAACTACCTGAAACTGTCCGCGCTGGCGCTCGGTCTCGTCTGTGCCGGGCAAGCGGCTGCCGAGAACCTCACTGCGGTGAGCTTCGGCGGCGCCA ACAAGCAGGCCCAGGTGAAGGCCTTCTATCAGCCGTGGGAAGCCGCCGGTCACGGCCGCATCGTCGCCGGCGAATACAACGGCGAAATGGCCAAGGTCAA GGCGATGGTCGACACCAACAGTGTGTCGTGGAACCTGGTGGAGGTGGAGTCGCCGGAGCTGGCGCGCGGTTGTGACGAGGGGCTGTTCGAGGAGCTCGAT CCGGGCGTCGTCGGCAATCCGGACGATTTCGTCGAGGGTGCGATACAGCCCTGCGGCGTTGGCTTCTTCGTCTGGTCGACGGTACTCGCCTATAACGCCG ACAAGCTCAAGAACGCGCCGTCCGGCTGGGCGGATTTCTGGGATACCGAGAAATTCCCCGGCAAGCGCGGCCTGCGCAAGGGTGCCAAGTACACCCTGGA ATTTGCGCTGATGGCCGATGGTGTGCCGGCCAAGGAGGTCTATCAGGTGCTGGCCACCAAGGACGGCCAGAACCGCGCCTTCAGAAAGCTCGATCAGCTC AAGCCGCACATCCAGTGGTGGGAAGCCGGCGCGCAGCCGCCGCAGTTCCTCGCCTCCGGCGACGTGGTAATGAGCAGCGCCTACAACGGCCGCATCGCTG CCGTGCAGAACGAGAGCAACCTGCAGATCGTCTGGAGCGGCGGCATCTACGACTTCGATTCCTGGGCCATCCCCAAGGGCGCGAAGAGCCAGGAGCAGGC ACGCAAGTTCATCGCCTTCACCGTCGAGCCGCAGCAGCAGAAGGCCTATGCCGAGAACATCGCCTATGGCCCGGCGAACACCCAGGCCGTGTCGCTGCTG GATGAAAAGCGCCTGGCGCAGATGCCCACCGCGCCGGAGAACATTGCCGACCAGGTGGCGATGGACGTGACCTTCTGGGCCGACTACGGCGAACAGCTCG AACAGCGTTTCAACGCCTGGGCAGCACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGGAGCCCCGCCGCATGGGCGGGGCCGGTCCCAGCCATCGGAACGAATCGCGGAGTCTTCATGGCCACAGCAATATCCCTGCCGGCGAACCAGATCG CCGAGCCCAATCTGAAACAGCGACTGGCACGGGCCGAACGGGTGAACAAGCTCAAGTCGCAGGCGCTGATCCTGCCGCTGCTGCTGTTCGTGCTGCTGAC CTTCCTGGTTCCCATCGCCTCGCTGCTCTGGCGCAGTGTCGAGAATCCGGAGGTGGTGAACACGTTGCCGCGCACGCTGGAGGCGCTGGCCGCATGGGAT GGTCGCGGACTGCCGGCGGAACCCGCCTACCAGGCATTGGCCGAGGACCTCTATCAGGCGCGCCGTGAACAGAGCCTGGGCGATCTGTCCAAGCGGCTGA ACATGGAACTGGCCGGCTATCGCAGCCTGCTGACCAAGACCGCGCGGGCGCTGCCGTTCCGCGAGACACCCGCGTCGTATCAGGAGGCACTGGAGTCGCT
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| Amino Acid Sequence |
>spermidine/putrescine ABC transporter substrate-binding protein
MSNYLKLSALALGLVCAGQAAAENLTAVSFGGANKQAQVKAFYQPWEAAGHGRIVAGEYNGEMAKVKAMVDTNSVSWNLVEVESPELARGCDEGLFEELD PGVVGNPDDFVEGAIQPCGVGFFVWSTVLAYNADKLKNAPSGWADFWDTEKFPGKRGLRKGAKYTLEFALMADGVPAKEVYQVLATKDGQNRAFRKLDQL KPHIQWWEAGAQPPQFLASGDVVMSSAYNGRIAAVQNESNLQIVWSGGIYDFDSWAIPKGAKSQEQARKFIAFTVEPQQQKAYAENIAYGPANTQAVSLL DEKRLAQMPTAPENIADQVAMDVTFWADYGEQLEQRFNAWAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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