Strain | Pseudomonas veronii 1YdBTEX2 Contig63, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCTGGGCTTTCGGGCAGCTGAAACGGAATTTCCACTGGTTGCCGCTCTTGTCGGTCACTTGCTGTTTGCAGCCCGACTGCGGATCGGTCAGCGGGATCGC GTCGGAGGCGACCTGGGCGGGGGTGAGGCACACCTGCACGCCTTTACCGGCCATGGTGATGCCTTGTTTCTCCAGCATGGCGCGCTGTTCGGGGGTCATT TGTTGCTTGAGCTGACCGAGGATCAATGACAAATCCGGCAGGTCCTGGTTATCCACTTTCATGTTGCTCGTGGTCAATTCCCACAAACCAGGCGCCAGCA TCTGCGCCTGGGCCGCCACGGGCAGCGACAAACCAATAACCATGGCCAAACCTAGCAGACGAGCATTCATCGGGTAACTCCTGGATAATTGTGGGCATTA GACGCCACAAAAGCGCCAGTGTTGCACGGCAAATAAAATAGCGACATTCCTGACCGAACATGGTCTGTTAGGCACTGGATTGCCTGGAGTACCATCGTCC
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DNA Sequence for Gene |
>H736_RS0130655
ATGGATTTTTTTGGCCCGCACCTGCTCGCCTACTTCATCGCCACGCTGCATTTTCTTGGGACGCTCGCCGCGATCCATGCAGTGCTGACCGTCAGGACCG CCCAAGGCTCGATTGCCTGGGCGTTGTCGCTGATGTTCATACCCTACCTCACGCTGATCCCGTACCTGATCTTCGGCCGCAGCACCTTCGATGCGTACAT CCAGGCGCGGCGCCAGGCCAACCAGGAAATGCACACTGCGATCAACGAGCTGAACTGGCGCCCGTGGGTCGAGGAAGCCCTGGCCGCCCGCAACTCCAGC GCCTACGCCTCCCTGCGGGCGATGCCGAAACTGGGCCGCATGCCGTGCCTGGCGAATAATGAAGTGCGTTTGCTGATCAATGGTGACGCCACCTTCAGCG CGATCTTCGAGGCAATTCGCCGCGCCAAAACCGCCGTGCTGTTCCAGTTCTTCATCATTCATGACGACGAACTCGGTCGGCAGTTGCATGCCTTGCTGAA GGAAAAAGCCGCCCAAGGCGTCGCCGTCTACGTGCTCTACGACCGTATCGGCAGCCACGCCCTGCCCTCTCACTATGCACAAACGCTGCGCGACGCCGGG GTGCAGGTCAAGGCGTTCGCCACCCGCAGCGGCTGGCTCAATCGCTTCCAGGTCAACTTCCGCAACCACCGCAAGATCGTGGTGGTGGATGGCATCACCG GGTTTGTCGGCGGGCATAACGTCGGCGATGAGTATTTGGGCAAAAAACCGCCGCTGGCGCCGTGGCGCGATACCCATGTGCAGGTCACCGGCCCGGTGGT GGCGTGCCTGCAGGAATCGTTTGCCGAAGACTGGTTCTGGGCGGCGCGGGAACTGCCGCCGCTGATCCTGCCGGACACCTACCCCGAAAACGGCGTGCTC TGCCAATTGCTCGCCAGCGGTCCGGCCGACCCTTATGAAACCTGTTCGCTGTTTTTTGTCGAAGCGATCCACGCCGCGACCGAGCGGGTGTGGATCACCA GCCCGTATTTCATCCCGGATGAAGCGGTGTTTGCCGCCCTGCGCCTGGCGGTGCTGCGCGGGGTCGACGTGCGCCTGCTGCTGCCGTCGCGGCCCGACCA CCGCATCGTGTATGCCGCCTCCAGCCTTTACGCGATCGAAGCGGTGCGCGCCGGGGTGCGGGTGTTCCGCTATACGCCGGGGTTTCTGCACCAGAAAGTG GTGTTGGTCGACAGCGAAATCAGCGCCATCGGCAGTGCGAACATGGACAACCGTTCGTTCCGCCTGAATTTCGAGGTGATGTTGCTGACCGTCGATGAAG CCTTCGCCCAGCAAGTGGAACACATGCTGCTCGATGACTTCGCCCAGGCCCATGAAGTCAGCCAGGAAGAAAGCCGCGAAACCCGCCGCCTACAACAACT GGGCATGCGGGTCGCGCGGCTTATCTCACCGATTCTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CAGACGCTGCGGTAAAAAGTGGGAGGGGGCTTGCCCCCGATAGTGGTGAATCAGTGGCCAATCCGCTAGCTGACACACCGCCATCGGGGGCAAGCCCCCT CCCACATTTGGATCTGCGGGGCTGTGGGGAAATGCTTCAGCGGTAGATATCTTCCCGCGTCCACGGCAGTTCGTGGCTGCCATCGGCGAAGGGTTTTACC GCCAGTATGCGGATCGCACGGCGTGTTTCACCGCTTCACCAACAGACGCTGCGGTAAAAATGTGGGAGGGGGCTTGCCCCCGATAGTGGTGAATCAGTGC CCAATCCGCTAGCTGACACACCGCAATCGGGGGCAAGCCCCCTCCCACATTTGGATCTGCGGGGCTGTGGGAAAATGCTTCAGCGGTAGATATCTTCCCG CGTCCACGGCAGTTCATGGCTGCCATCGGCGAAGGGTTTTACCGCCAGTATGCGGATCGCACGGCGTGTTTCACCGCTTCACTAACAGACGCTGCGGTAA
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Amino Acid Sequence |
>cardiolipin synthetase
MDFFGPHLLAYFIATLHFLGTLAAIHAVLTVRTAQGSIAWALSLMFIPYLTLIPYLIFGRSTFDAYIQARRQANQEMHTAINELNWRPWVEEALAARNSS AYASLRAMPKLGRMPCLANNEVRLLINGDATFSAIFEAIRRAKTAVLFQFFIIHDDELGRQLHALLKEKAAQGVAVYVLYDRIGSHALPSHYAQTLRDAG VQVKAFATRSGWLNRFQVNFRNHRKIVVVDGITGFVGGHNVGDEYLGKKPPLAPWRDTHVQVTGPVVACLQESFAEDWFWAARELPPLILPDTYPENGVL CQLLASGPADPYETCSLFFVEAIHAATERVWITSPYFIPDEAVFAALRLAVLRGVDVRLLLPSRPDHRIVYAASSLYAIEAVRAGVRVFRYTPGFLHQKV VLVDSEISAIGSANMDNRSFRLNFEVMLLTVDEAFAQQVEHMLLDDFAQAHEVSQEESRETRRLQQLGMRVARLISPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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