Pseudomonas veronii 1YdBTEX2, H736_RS0130240

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig63, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TATCCGAGCTGCGGCCGATAGCTATCGAGCCCTTGTTCAAGGACTTTTCGGCACACTGCCCAGGGGTAATCTTGTGATAACTAGTGATAGTCAAACACAG CGACATCTTGCCTCCTTGCTGATACTTCGCGCGCAATCGATTCCCGGCGAGCGCCTTTCCCGAGAGATCGCGCCAGGCGACGCGAACCACGGTCATAATC TGCTTTTTGCCAGCATGATCGCAGATCTTAACTGGCCTCAATGACAAAAACCCTGTCGTGGAACACCACTCGACTCACCAGTCGCGCAGGTTGTTAAGTA CCGCACATCTGTCACAGAGGGCGAATAGCTTACCTTGACAAGCCACAACTACTACACCAAAAATGCACAACTTCTTGAATACCAGTGATGGCACATTAGT GGCGCCACATGTATATGACCAAGAAAACATGCAAAGTTCATCACGCAACTAATGCATGAATTGCCCGTCATCTAACGGGCCGATAGGGAGATCGATTTCA
DNA Sequence for Gene
>H736_RS0130240
GTGGATGTGCCGTTGCTGCTCGCCGCCGTTTCCGCGACTTCGCCATGCGGCGAAGACATGGAATATGACGCGCAATTTCTACAACTGGAGCGTGATGCCA AGGGGCAGCCCGAGCGCAGCATGGGCGACGCCATCCTGCCTGCCGAACCGCCGGACTGGCGCAGCATCCAGCAGCAAAGCCTCGACCTGTTGCAACGCAG CAAAGACCTGCGCATCACCCATTTCCTGCTGCAAAGCGCCCTCGCCCTCCAGGGTGTGGCCGGGTTGGCCGACGCGCTCACGCTGATCAACGCGCTGCTG CGCGAATACTGGGCCGACCTGCACCCGCGCCTGGATGCCGACGACGATAACGACCCCACCGTGCGTATCAACGCCCTGTCCGGCTTGACCGGCGACGCGA CGATCCGCCTGCTGCGCGAAAGCATCCTCACGCGCTCGCGCACCTTCGGCGCCGTGAGCCTGCGCGCCGCGCTGAACGCCAGCGGCCTGATGAGTTTTCC CGATGAACAACTCGGCGCCCAGCAGCTCAACGCCGCGTTCCTCGACAGCGACCCCGAGCAACTGCAAGCCACCCGCGACGCCTTGAGCACCGCACGTGCC GCCTGCGAAGCCATCGAACAACAGGTCAGCGACCAGGTCGGCTCGGCCCAGGGCGTCGACCTCAGCCTGTTGAAGCAACCGCTCAAGCAGGCGCTGCAGA TCCTCAGCCAATGTGTACCGAACGGTGAGACCAGCAGCCGCGAACCCGAGGCCGTCAGTGACGACAATGCCCCCTCGGCCGACTTCGCCGCCGCCCCCAC CGCACCGCGCCCCAGCGGCGACATCGCCAACCGCGATGACGTGCTGCGCAGCCTCGACAAGATCCTTGCGTACTACACCCGTCACGAGCCTTCGAGCCCG CTGCCGGTGCTGTTGAACCGCGCAAAGCATCTGGTGCATGCCGACTTCGCGGCCATCGTGCGCAATCTGATTCCCGACGGCATGTCCCAATTTGAAAACC TGCGTGGCCCGGACGGCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGCCCGACTGCGCAGTAACAACACCGTCGCTCAAGCGACCAGGAGCAGCAACGTGGCGAAGCAAAGTTCTCAGAAATTCATCGCGCGCAACCGCGCGC CTCGAGTGCAGATCGAGTACGACGTCGAGCTCTACGGCGCCGAGAAAAAGGTCCAGCTGCCCTTCGTGATGGGTGTGATGGCCGACCTCGCCGGCAAACC CGCCGAGCCCCTCGCGCCCGTGGCCGACCGCAAGTTCCTTGAAGTGGACGTCGACAACTTCGACTCGCGCCTCAAGGCCATGCAACCGCGCGTAGCGTTC CACGTACCCAACGAGCTGACCGGCGAAGGCAACCTGAGCCTGGACATCACTTTCGAAAGCATGGACGACTTCAGCCCGGCCGCCGTGGCTCGCAAGGTCG ATGCGCTGAACAAGCTGCTCGAAGCCCGTACCCAGTTGGCCAACCTGCTGACCTACATGGACGGCAAGACCGGCGCTGAAGAAATCATCATGAAAGCGAT
Amino Acid Sequence
>type VI secretion protein ImpA
MDVPLLLAAVSATSPCGEDMEYDAQFLQLERDAKGQPERSMGDAILPAEPPDWRSIQQQSLDLLQRSKDLRITHFLLQSALALQGVAGLADALTLINALL REYWADLHPRLDADDDNDPTVRINALSGLTGDATIRLLRESILTRSRTFGAVSLRAALNASGLMSFPDEQLGAQQLNAAFLDSDPEQLQATRDALSTARA ACEAIEQQVSDQVGSAQGVDLSLLKQPLKQALQILSQCVPNGETSSREPEAVSDDNAPSADFAAAPTAPRPSGDIANRDDVLRSLDKILAYYTRHEPSSP LPVLLNRAKHLVHADFAAIVRNLIPDGMSQFENLRGPDGE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site