Pseudomonas veronii 1YdBTEX2, H736_RS0127990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig57, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCAAGACCGCGTTCCTGGTGTTCGGCGTGCAACTGGCCGAAGCCCTGAAAGTCGCCGAGAAGATCGACGCCACCGTGGTCGACATGCGTTTCGTCAAA CCGCTGGATGAAGCACTGGTGCGCGAGATCGCCGCCGGCCACGAACTGCTGGTGACGGTCGAAGAAAACGCCATCATGGGCGGTGCCGGTGCGGCGGTCA GCGAGTTCCTGGCGCGCGAGAACATCCTCAAGTCGGTGCTGCACCTGGGCTTGCCGGATGTGTACGTCGAACACGCCAAGCCGGCGCAGATGCTCGCCGA GTGCGGGCTCGACGAGGCGGGTATCGAGGCGTCGGTCCGCGAACGCATGACACTCCTGGGTTTATAACCCCCCGAGACTTCTGTAGGAGCGAGCTTGCTC GCGAAAAACGTCAACGATGACGCGTGCACTCTGTATGCACGCGGTGTCCTCAGGTTTTTCGCGAGCAAGCTCGCTCCTACAAAAAGCTATGGACCGCTCT
DNA Sequence for Gene
>H736_RS0127990
ATGAATCACCTGCGCCTTGCCCTGCCCTTGCTGCTTCTGCCAGCCCACGACCTGCTCGCCGACACCCGCGACGCCGCGCTGAAACTCCCCGACGTGGTCA TCAGCGCCAACCGCCAGGTCCAGGCGCGCAACGACAGTAGCGCCGCCAACACCGTCTTCACCCGCGACGACATCGACCGCCTGCAACCCACCAGCCTGAC CGACCTGCTCAGCCGCGTGCCCGGCGTGCAAGTGGCGCCCACCGGCGGCCGTGGCAGCTTGCCGGGCATCTACCTGCGCGGCACCAAGTCCGCGCAAAGC CTGGTGCTGGTGGACGGCCAGCGCATCGCCAACGCCACCTCCGGCGACAGCGGCCTGCAATACCTGAATGTGGACCAGATCGAGCGCGTCGAAGTGCTGC GCGGCTCGCGCTCGGTGATCTACGGCAGCGATGCGATTGGCGGGGTGATCCAGGTGTTCACCCGGCGCAATGCCGAACAGGGCCTGCAGCCGCGCCTGCG GCTGGGCTTCGGCAGCCACCAGAGCTGGGAGCGCAGCCTCGGGCTGTCCGGCGGCGACGAACACACGCGCTTCAACCTGGGCGCGAGCCTGGATGAAAGC GCTGGCATCAACTCGACACACACCTCGTTTCCCAGCGATGGCGACCATGATGCCTACCGCAACCAGTCCGTCAGCCTGAACCTCAGCCACAGTTTCAGTG ACGCGTTGGAAGCCGGTTTCAACCTGTTGGATAGCCGCGGCAAGTCGGAGTACGACGTCAGCTTCGGCCAGAAACCCTACACCGACTACGCCGTGAGCAG CGCCAGCGGCTATGCCGACGCCCGCCTCAGCGAACGCTGGCAATCGCGCCTGGAACTGGGCCACAGCGAGAACCGCGATACCAAGCGCGATACGCTCAGC GATGAGTTCAGCGTGTTCAACACCTACCGCGACTCGCTCAACTGGCAGAACGACCTGACGCTAAATGACCGCAACAGCCTGATCCTCGGCGGTGACTGGT ACGAAGACCGCTTCCACGGCTCCACCACCTTCACCGAAAACAGCCGCTGGAACCGCGCCGCGTTTGTGCAGCATCGTTTCCACAGCGAATGGTTTTCCAC CGAACTGGGCCTGCGCCATGACCAGAACCAACAGTTCGGTAGCCAGAACAGCTGGAGCGGCACCCTCACCGTGCCGATCAATCCCGACAATGATGTGCTG CTCAGCTACAGCGAAGGCTTCCGTGCGCCGACCTTCAATGACCTCTATTACCCGGAAACGCAGTACAGCAACAGCAACCCCAACCTTCAGCCCGAGACGT CGAAGAGTTACGAGCTGCAATGGCGCAGCCAGCTCGGCGACCACACGCGCCTGGAAACCTCGCTGTACCGCACCGACTTGAGCGACGCGATCATCCTCGA CGGCGACAAACCGCAGAACGTCGCCTCGGCGCGTATCAATGGTTTTGAAGCCGCGCTCAAGCACGAGCTGTTCGGCTGGCAGGGCAACCTGGGCGTTTCG CTGATCGACCCGCGCGACCGCGACAGCGGCCACACCCTCGCCCGCCGTGCGCGGCGCACCCTGAACCTGGACCTGGATCGGCAATTCGATCAACTCGGCG TCGGTGCGAGCTGGCAGGCGATCAGCAGCAGCTACGACGACGAAGCCAATCGCAATCGCCTGGGCGGTTATGCCTTGCTCGGGCTGCGCAGCAGTTGGGC GCTCAGCCGGGAAGTGGCGTTGTCGCTGAAAGTCGATAACGTGCTGGACAAGACTTACGCTCGGGCACGTTACAGCTATGACGATCCGGAGCTCCTGAAC AATCAGGACTATCGGGAAGAAGGTCGGGTGTGGAGGGTTGGCGTGACCTGGACGCCGACGCTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TAGAAACGTCGGCGTGCCTGCGATTGCGTCAGCGGTTCGGCGCAATCACCTGACACAACTGCGCCAAGGCTTCCAACATCTGCCCGCTCGGCCGTTCCAG GCCCTTGTCCGGCACCAACAGCAAACGCCCCTGCGCCACCGCCGCCAGCTGCGGCCAGGCTTTCCAGGCATCCAACTGCGGTTGATCCGCCGCCAGAATC ACCTCGGGGTTGCGCTGCAGCACCGACTCGATGCTGACCTGCGGCGCGGGCAGCGTGAGGTCGTCGAACACATTGCGCGCGCCGCACACACTCAGCGCAT CGCTGATGATCTGCCCACCGCCCACGGTGTACAAAGGCGGGCTCCACACTTGGTAAAACACCCGCAGGGGTTCGGCACGCTGATAGCGCTGGCGCAACCC GGCCAGGCGTTGGCGCAACTGCGCAGACAATTGCCGGCCGGCGTCGGCGCGCCCCAGTTGCTCGGCGATGGCCTGGACCTGCTGGGTCAGTTGTTCGAGG
Amino Acid Sequence
>B12 family TonB-dependent receptor
MNHLRLALPLLLLPAHDLLADTRDAALKLPDVVISANRQVQARNDSSAANTVFTRDDIDRLQPTSLTDLLSRVPGVQVAPTGGRGSLPGIYLRGTKSAQS LVLVDGQRIANATSGDSGLQYLNVDQIERVEVLRGSRSVIYGSDAIGGVIQVFTRRNAEQGLQPRLRLGFGSHQSWERSLGLSGGDEHTRFNLGASLDES AGINSTHTSFPSDGDHDAYRNQSVSLNLSHSFSDALEAGFNLLDSRGKSEYDVSFGQKPYTDYAVSSASGYADARLSERWQSRLELGHSENRDTKRDTLS DEFSVFNTYRDSLNWQNDLTLNDRNSLILGGDWYEDRFHGSTTFTENSRWNRAAFVQHRFHSEWFSTELGLRHDQNQQFGSQNSWSGTLTVPINPDNDVL LSYSEGFRAPTFNDLYYPETQYSNSNPNLQPETSKSYELQWRSQLGDHTRLETSLYRTDLSDAIILDGDKPQNVASARINGFEAALKHELFGWQGNLGVS LIDPRDRDSGHTLARRARRTLNLDLDRQFDQLGVGASWQAISSSYDDEANRNRLGGYALLGLRSSWALSREVALSLKVDNVLDKTYARARYSYDDPELLN NQDYREEGRVWRVGVTWTPTL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site