Pseudomonas veronii 1YdBTEX2, H736_RS0126720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02239 Cytochrome D1 heme domain - - 160 552 0.0
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 27 130 1.4E-28
Gene3D G3DSA:2.140.10.20 - IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily 131 557 0.0
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 50 123 2.1E-9
FunFam G3DSA:1.10.760.10:FF:000027 Nitrite reductase - - 26 130 3.8E-47
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 9 148 2.87E-21
SUPERFAMILY SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily 132 557 4.05E-126
FunFam G3DSA:2.140.10.20:FF:000001 Nitrite reductase NirS - - 132 557 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.