Pseudomonas veronii 1YdBTEX2, H736_RS0124560 (gyrB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig37, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCTTTGAGCAGACCTTGAGTGAGCTGTTGGACCTCGAAGGGCTGACGCTGAGCTACTACCGCGGTTGGGACAAAGAGCGTGAACTGAGTGCAGTGCTC GCCACGTCCTTGCAGCGGGATCAGCAAATCGGCCACACCCAGGCCGGCCCCCAGCGCGCTGATTTGCGTCTTAGGTTAGGCGCACATAATGCCGCGGATA TCTTGTCCCGCGGCCAGCAGAAGCTGGTGGTATGTGCATTGCGTATCGCCCAAGGGCATTTGGTTAGCCAGGCCCGGCGCGGTCAATGTATTTATCTGGT GGATGATTTGCCGTCAGAACTTGACGAGCAACACCGCCGAGCGTTATGCCGCTTGTTGGAAGACTTACGCTGCCAGGTGTTTATCACCTGTGTAGACCAC GAATTATTGAGGGAAGGCTGGCAGACGGAAACGCCAGTCGCTTTGTTCCACGTGGAACAAGGCCGTATCACCCAGACCCACGACCATCGGGAGTGAAGGC
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| DNA Sequence for Gene |
>H736_RS0124560
|gyrB
ATGAGCGAAGAAAACACGTACGACTCGACCAGCATTAAAGTGCTGAAAGGTTTGGATGCCGTACGCAAACGTCCCGGTATGTACATTGGCGACACCGATG ATGGTAGCGGTCTGCACCACATGGTGTTCGAGGTGGTCGACAACTCCATCGACGAAGCTCTCGCCGGTCACTGCGACGACATCAGCATTATCATTCACCC GGATGAGTCCATCACCGTGCGCGACAACGGTCGTGGCATTCCGGTAGACGTGCATAAAGAAGAAGGCGTTTCGGCGGCAGAGGTCATCATGACCGTGCTC CACGCTGGCGGTAAGTTCGACGACAACTCGTACAAAGTATCCGGTGGTTTGCACGGCGTAGGTGTTTCCGTAGTAAACGCCCTCTCCGAACTGCTGGTGC TGACCGTGCGTCGCAGCGGCAAGATTTGGGAGCAGACCTACGTTCACGGTGTTCCGCAGGAACCGATGAAGGTTGTTGGCGAAAGCGAAACTACCGGTAC CCAGATTCACTTCCGTCCTTCTGACGAAACCTTCAAGAACATCCACTTCAGCTGGGACATCCTGGCCAAACGGATTCGTGAACTGTCCTTCCTCAACTCC GGTGTCGGCATCGTCCTCAAGGATGAGCGCAGCGGCAAGGAAGAGCTGTTCAAATACGAAGGCGGCCTGCGTGCGTTCGTTGAATACCTGAACACCAACA AGACTCCGGTCAACCAGGTGTTCCACTTCAACGTCCAGCGTGAAGACGGCATCGGCGTGGAAATCGCCCTGCAGTGGAACGACAGCTTCAACGAGAACCT GTTGTGCTTCACCAACAACATTCCGCAGCGCGACGGCGGTACTCACCTGGTGGGTTTCCGTTCCGCACTGACGCGTAACCTGAACACCTACATCGAAGCC GAAGGCCTGGCCAAGAAGCACAAAGTTGCCACCACCGGTGACGATGCGCGTGAAGGTCTGACTGCGATTATTTCGGTGAAAGTACCGGACCCTAAGTTCA GCTCCCAGACCAAAGACAAGCTGGTGTCTTCCGAAGTGAAGACCGCCGTGGAACAGGAGATGGGCAAGTACTTCTCCGACTTCCTGCTGGAAAACCCGAA CGAAGCCAAGCTGGTTGTCGGCAAGATGATCGACGCAGCGCGTGCCCGTGAAGCCGCGCGTAAAGCCCGTGAGATGACCCGCCGCAAAGGCGCGCTGGAC ATCGCCGGCCTGCCGGGCAAACTGGCTGACTGCCAGGAGAAGGACCCTGCCCTCTCCGAGCTGTACCTGGTGGAAGGTGACTCTGCTGGCGGTTCCGCCA AGCAGGGCCGTAACCGTCGCACCCAGGCCATCCTGCCGTTGAAGGGTAAGATCCTCAACGTCGAGAAAGCACGCTTCGACAAGATGATTTCCTCCCAGGA AGTCGGCACCTTGATCACGGCGTTGGGCTGCGGTATCGGCCGCGACGAATACAACATCGACAAGCTGCGCTATCACAACATCATCATCATGACCGATGCT GACGTCGACGGTTCGCACATCCGTACCCTGCTGCTGACCTTCTTCTTCCGTCAGTTGCCGGAGCTGATCGAGCGCGGCTACATCTACATCGCCCAGCCGC CGTTGTACAAAGTCAAAAAGGGCAAGCAAGAGCAATACATCAAAGACGACGACGCCATGGAAGAGTACATGACGCAGTCGGCCCTGGAAGACGCCAGCCT GCACTTGAACGAAGAAGCGCCGGGCATTTCCGGTGAGGCGCTGGAGCGTCTGGTCAACGACTTCCGCATGGTCATGAAGACGCTCAAGCGTCTGTCGCGC CTGTACCCTCAGGAGCTGACCGAGCACTTCATCTACCTGCCGGCCGTGAGCCTGGAGCAGTTGGGCGATCACGCAGCGATGCAGGATTGGCTGGCCCAGT ATGAAGTGCGTCTGCGTACCGTCGAGAAATCCGGCCTGGTGTACAAAGCCAGCCTGCGCGAAGACCGTGAACGTAACGTGTGGCTGCCCGAGGTCGAATT GATCTCCCACGGTCTGTCCAACTACGTCACCTTCAACCGCGACTTCTTCGGCAGCAACGACTACAAAACCGTGGTCACCCTGGGCGCACAACTGAGCACC CTGCTGGACGATGGCGCTTATATCCAACGTGGCGAACGCAAGAAGCAGGTCAGGGAATTCAAGGAAGCCCTTGACTGGCTGATGGCCGAAAGCACCAAGC GTCACACCATCCAGCGCTACAAAGGTCTGGGCGAGATGAACCCGGATCAACTGTGGGAAACCACCATGGACCCCGCTCAGCGCCGTATGCTGCGCGTGAC CATCGAAGACGCCATCGGCGCAGACCAGATCTTCAACACCCTGATGGGTGATGCGGTCGAGCCTCGCCGTGACTTCATCGAGAGCAATGCTTTGGCGGTG TCTAACCTGGATTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGGGTGTAGGAACTCACAAAAGCAGCTGACGTTCACACTATGCTGCTTTCGCCGCGCTACAAAAAAGGCCAACCCCTGCGGGTTGGCCTTTTTTTGCCC GTATGTCCAGGAACGCGCGAGAGCTCTGCCAATTGGATTCACAGCGAGAGTTGCCGTAGTAGCGTAAAGGCCTGCTTCATTTGGTCTTCACTGACGACGA ACGCACGTAGCTGCCCTGCCATGTCCAGACCTTTGGCTATCAGCCCCTGTGCCTCAAGGCTGATCTGCCATTGCAAGTCCTTGCGGCTGGTTTCTCCGGC CAGGTGCAGCGGCATTTCCGGAGTCTTTACCTTCACCAGCATCGCCGGGAACTTAACTTCCTCATTCCCACCCAGCACATTACGCGCCAGGGTCATGGCG CTTACCTGGATAGGTTGCAGAAACGGCAGTAGCTTGCCCTGGATTTGCGCGCAATCGCCAACGGCGAATATGCGTGGGTCAGAGGTACACATGCGTTCAT
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| Amino Acid Sequence |
>DNA gyrase subunit B
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL HAGGKFDDNSYKVSGGLHGVGVSVVNALSELLVLTVRRSGKIWEQTYVHGVPQEPMKVVGESETTGTQIHFRPSDETFKNIHFSWDILAKRIRELSFLNS GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTPVNQVFHFNVQREDGIGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNIDKLRYHNIIIMTDA DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDDDAMEEYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR LYPQELTEHFIYLPAVSLEQLGDHAAMQDWLAQYEVRLRTVEKSGLVYKASLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVTLGAQLST LLDDGAYIQRGERKKQVREFKEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV SNLDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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