Pseudomonas veronii 1YdBTEX2, H736_RS0123980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig36, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGAGAAGCAAGTAATGCCACCCTTGAGCTGTTCGGCGATGGCCAGGTCGGTGCCGTCGCGCACGAAGGCTTCATCGACCCACTTGGTCTCGGCGGGCCA GATGTGTTTTTCCAGCCAGGTCATCAGCGGCAGATCATCGGCCAGGCCGCGAAACAGGGTCATCGCCGCGTGGCCGTGGGCGTTGATCAGGCCGGGGCTG AGCAGCATGCCCGGCAGCTCGCGCACTTCACTGGCGGAAAGTTTCAGTGCCGCGGCCCGCGGGCCGATAAAGGCAATACGCCCATCGCGGATGCCCAGGC CATGCTCCTTGAGCACCACGCCGGCGGGTTCGACAGGTACCAGCCACGTCGGCAGTAGCAATAAGTCGAGCGGGGCGGCAGTGGAGGTCATCGCAGGCTT CTTCCCGGGCAGCAATAAAAGAAGGGCGAAGTATACCCGAGCGTCCTGGCTGGCGGATCGCTATAATCGGCGGCTTTTGTTCATGAGTGCGGGGTGAGGG
DNA Sequence for Gene
>H736_RS0123980
ATGCGCGATCGACTGTTGGCTGCGGAGAAAGTGAAGGCCATCGATTGGCGCGATGGCGCACTGCACCTGCTCGACCAGCGTGTTTTGCCGTCCCGGGAAA GCTGGGTGACCTGCTCCACGGTCGATGAAGTGGCCGCGGCCATACGCTCGATGGTCGTGCGCGGCGCAGCGGCCATCGGCATCAGTGCCGCCTACGGCCT GGTACTCGCCGCCCGCGAACGGATCGACGAGGGCGATGACTGGCAGGCTGGATGGGAAGAAGACTACGCACTTTTGGCCGATACCCGCCCGACCGGCGCA AACCTGCTCTGGGCCCTCAAACGCATGCGCGACCGCCTGGACCGTCTCAAACAGCACGCCGACCCGCTGGCGTTGCTGGAGGCCGAAGCCATCGCGATCC ATGAGAGCGACCGCGAAGCCAACGTCGTCATGGCCCAGTTGGGCGTCGAGCGGATTCGCAAGCACCAGGGCAACGCCCAGGCGATCCTGACCCATGGCAA CGCAGGCGCCCTGGCCACAGGAGGCGTCGGCACGGCCCTCGGCGTGATCCGCGCGGCCTTCCTGGAGGGTCTGGTCGAGCAGGTCTATGTCAACGAAACC CGGCCATGGTTGCAAGGTTCGCGGCTGACGGCGTGGGAATTGGCTGGCGAGGGGCTGCCCGTCACGGTCAATGCCGACTCGGCGGGCGCGCATATCCTCA AGACCAAAGGTGTGACCTGGGTGATCGTCGGCGCCGACTGCATTGCGGCCAACGGTGATGTGATCGGCAAGATCGGCACTTATCAATTGGCGGTGTGCGC CATGCACCATGGCGTGCGTTTCATGGTGGTGGCGCCGAGTTCGACCCTGGACCTGATGATGGCCTCCGGCGATGACGTGGCCCTGGAAGAGCGCGCTGCG GGCGAGTTGCTGGACGTCGCCGGGCAGCGCTTCGCTGCGGATGTGAATGCCTTCAATCCGGTGTTTGATGTGACCCCGGCCGACTTGATCGACGTGATCG TGACCGAAAAGGGTGTTGTCGAACGGCCTGACACGGCCAAGCTCGCCAAGTTGATGTGCCGTAAACGCCTGCATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGCTTTGGTGGCTGTTAGATTGCCATCGGGAGCAAGCTCCCTCCCACATTTGACGGTGTTCACAATTTGAGTGTGGCAGGGGGCTTGCTCCCGATTGGC CTTGAAAGGCTATGGTTTCTTTGGATCTGCCGCGCAAAAACAGCACCACCCCGGCTCTAAGCCCCTCTCGTCGCCCTCAAGCCTGTCATCCGTCAACTTA CTATGCTCCATGCCCGTCAGGGGGATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAGGGTCGCCCCGAGGGGCTGCCTTTAACGTGCAG ATCCGTGTCATAACTCGTTGATTTGTCGTAAGTCGTTGCCAGGCACCATGCCGGCAGCGGCGAGCTTCGTTCGTCCCATATGGATGTGACGAGGTTTCAC CCGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACGAGCTGAAACAGTCCTACCTCGACTACGCGAT
Amino Acid Sequence
>methylthioribose-1-phosphate isomerase
MRDRLLAAEKVKAIDWRDGALHLLDQRVLPSRESWVTCSTVDEVAAAIRSMVVRGAAAIGISAAYGLVLAARERIDEGDDWQAGWEEDYALLADTRPTGA NLLWALKRMRDRLDRLKQHADPLALLEAEAIAIHESDREANVVMAQLGVERIRKHQGNAQAILTHGNAGALATGGVGTALGVIRAAFLEGLVEQVYVNET RPWLQGSRLTAWELAGEGLPVTVNADSAGAHILKTKGVTWVIVGADCIAANGDVIGKIGTYQLAVCAMHHGVRFMVVAPSSTLDLMMASGDDVALEERAA GELLDVAGQRFAADVNAFNPVFDVTPADLIDVIVTEKGVVERPDTAKLAKLMCRKRLH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site