Pseudomonas veronii 1YdBTEX2, H736_RS0118690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig25, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCACAACCTCTCGCTCGGCGTGGCCAACTCGATCACCGCGGTCGAGGAAGGCTGCGACCGCATCGACGCCAGCCTCGCCGGCATGGGCGCCGGGGCCGG CAACGCGCCGCTGGAAGTGTTCATCGCCGCCGCCGAACGCCTGGGCTGGAACCACGGCACCGACCTCTACACCTTGATGGACGCAGCGGACGACATCGTG CGGCCGTTGCAGGATCGGCCGGTGCGGGTCGACCGCGAGTCCCTGGCGCTGGGGTATGCCGGGGTCTATTCGAGCTTCCTGCGCCATGCCGAAATCGCTG CGGCCAAGTACGGTTTGAAGACCGTGGACATCCTCGTCGAGCTGGGCAAACGCCGCATGGTCGGTGGCCAGGAAGACATGATCGTCGACGTCGCGCTGGA CCTGCTCAAACGCTGAACCGTGCATCTCCCCGTCCGGTCGCCCACGCAGCGGCCGGACGGTTTTGCTGTGCCCATTACAACAATAAAACGGGTATTTCCC
|
|
| DNA Sequence for Gene |
>H736_RS0118690
ATGACATCGCTAAACGTGCTGACACCGTTGTACATGGCGCGGACCATCGGTCTGTGCTTCCTCGTGGCCCTGATGGAAGGCCTCGACCTGCAAGCCTCGG GCATCGCCGCCCAAGGCATGGCGGCAGCGTTCCAACTGGACAAACTACACATGGGCTGGGTCTTCAGCGCCGGCATTTTCGGCCTGCTGCCCGGAGCGTT TCTCGGCGGTTTGCTGGCTGATCGCATCGGCCGCAAACGGGTGTTGATGGCCTCGGTTGCGCTATTCGGATTGTTCTCGCTGGTCACGACCATGGCCTGG GACTTCAACAGCCTGCTGGTTGCGCGCTGCCTCACAGGCGTCGGCCTGGGCGCGGCACTGCCTAACCTGATCGCGCTGACCAGTGAAGTGGCTGGCCCGC GCCTGCGTGGCAGCGCCGTGAGCCTGATGTATTGCGGCGTGCCCCTGGGCGCGGCGCTGGCGGCCAGCATTGGCATCGCGCAACTGGCCGGCGGCTGGCA AGTGGTGTTCTACGTCGGCGGTATCGTGCCGTTGCTGATCGTGCCGCTGCTGGGGGTTTATCTGCCGGAATCCGCGGCGTTTCGCAGCGTGCGCGACGCC GCGCCGATCAGTGTGGCCAGCGGGCTGTTCCGCGGGGGCGCGGCATGGCCGACCGTGATGATCTGGGTCAGCTACTTCTTTACGCTCATGGTGGTTTACA TCCTGATCAACTGGCTGCCGAGCCTGTTGGTCGGCCAGGGCTTCAGCGGTTCTCAGGCCAGCTGGGTGATGCTCGCGCTGCAATTTGGCGCGGCGGCCGG CACGTTGTTGCTGGGCTGGGTCATGGATCGCCTGCCGGCCTGGGCGTTGTCGGCGCTGATTTACCTCGGCATCCTCGCGTCACTGACTGCGCTGGGCATG GCCACCCAATGGCACAGCATGCTGGCGGCCGGCTTCGTCGCCGGGTTCTTCGCCACGGGCGGGCAATGTGTGCTGTATGCCTTGGCCCCGCATTTCTATC GTCCGTCAATTCGCGCCACGGGCGTCGGCAGCGCCGTCGCCATTGGCCGGTTGGGTGCGATGAGCGGCCCGTTGGTGGCCGGCAAGATGCTCGCACTGGG CACGGGCACCACGGGCGTGATGATGGCCTCGGCACCCGGCATTGTCATCGCCGCGCTGGCGATGTTTTACCTGTCGCTGCGCCGCAACCGCTGCCCGACT GACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCAATCCGTACTCGCCTTCCGCGCCACGATGGCGCGGGGCTTACCCCTACAACAATAAAAGTGAACACTGCCATGCTCAGGAACTTCTTTCGGGGCG TCAGCGCCTGCACCTGCGTTTTTTTCGTAGACCAGGCCTGCGCCGCCGGTTTTGTCGACGACAGCCAGGCTGATCTGGTGATACGCAACTATTACTTCGA TCGCAATTACGTGAACGCCACGCCGCAGGCGGCTGCCCGCGAGTGGGCGCAGGGCTTCATTCTCAACATGCGCTCGGGCTATACCGAAGGGCCTGTCGGC TTCGGCCTGGACGCCCAGGGTTTGCTGGGCGCACGTCTGGACTCCTCGCCCGCACGCACGGGCACCGGCCTGCTACCGTACAACCACCAGACCCGTGAAC CGGCCAGCGAATATTCGGAGCTGGGCCTGACCGCCAAGGCCCGGGCCTCGAAGAGCGAGTTGCAACTGGGTACCATCAGCACGTTTCTGCCAATCGCCTT
|
|
| Amino Acid Sequence |
>MFS transporter
MTSLNVLTPLYMARTIGLCFLVALMEGLDLQASGIAAQGMAAAFQLDKLHMGWVFSAGIFGLLPGAFLGGLLADRIGRKRVLMASVALFGLFSLVTTMAW DFNSLLVARCLTGVGLGAALPNLIALTSEVAGPRLRGSAVSLMYCGVPLGAALAASIGIAQLAGGWQVVFYVGGIVPLLIVPLLGVYLPESAAFRSVRDA APISVASGLFRGGAAWPTVMIWVSYFFTLMVVYILINWLPSLLVGQGFSGSQASWVMLALQFGAAAGTLLLGWVMDRLPAWALSALIYLGILASLTALGM ATQWHSMLAAGFVAGFFATGGQCVLYALAPHFYRPSIRATGVGSAVAIGRLGAMSGPLVAGKMLALGTGTTGVMMASAPGIVIAALAMFYLSLRRNRCPT D
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|