Pseudomonas veronii 1YdBTEX2, H736_RS0116040

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig21, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCTTTGGGTGGTTTCCTGAAAAAAGGATTGCCTCATGGCTCTCGACGTTCAAGAAAAAGCACAAATCGTAGCTGACTATCAGCAAGCTGTTGGTGACAC TGGTTCGCCAGAAGTGCAAGTTGCACTGCTGACCCACAACATCAACAAACTGCAAGGTCACTTCAAGGCCAACGGTAAAGATCACCACTCCCGTCGTGGT CTGATCCGCATGGTAAACCAGCGCCGTAAGCTGCTGGACTACCTGAAAGGCAAGGATCTGGGTCGTTATCAGGCTCTGATCGGTCGCCTGGGTCTGCGTC GCTAATAAGCGATTGCGCTAGAGGTTGGTTGTTTGCCGTGTGTCAGTGGGATTCCCGCTGGCCCATGGCAGGCTTCCAGCCTCAAGTTTTATCTGGATAC ACGTTTTACCCCTGGACAAGGGTTGGGCCGATTCCCGACATTGCCCAAGAATTTCGCAAGAAGACAAGTTCCCCAAGAGCCACAAAGAAGGTAGGACACC
DNA Sequence for Gene
>H736_RS0116040
GTGAACCCGGTTATCAAAAAATTTCAGTTCGGTCAGTCGACCGTTACCCTCGAGACAGGCCGTATCGCCCGTCAAGCCTCCGGCGCAGTGCTGGTTACCG TTGACGACGACGTTACCGTACTGGTGACCGTTGTAGGCGCCAAGACTGCAGACCCAAGCAAGGGCTTCTTCCCTCTGTCTGTTCACTACCAGGAAAAGAC TTACGCTGCCGGTAAGATCCCTGGCGGTTTCTTCAAGCGCGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACTTCCCGACTGATCGACCGTCCGATCCGT CCGCTGTTCCCAGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTCGTCTCCACCAGCAAAAAGACCGATCCGGACATCGCTGCGATGATCGGTA CCTCGGCTGCCCTGGCTATCTCCGGCATTCCTTTCGATGGCCCGATCGGCGCTGCGCGCGTGGCTTTCCACGAAAGCACCGGCTACCTGCTGAACCCGAC TTACGAGCAACTGAAAGCCTCGAGCCTGGACATGGTCGTTGCCGGTACCTCGGAAGCCGTACTGATGGTTGAATCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCGGTACTGTTCGCTCACGACGAGTTCCAGGTTGTGATCAACGCCGTCAAAGAACTCGCTGCCGAAGCCGCCAAGCCAACTTGGGCCT GGGCTCCGCAAGCCGAAGCCACCGAACTGCTGGGTGCGATCCGTGCCGAGTTCGGCGAAGCGATCTCCCAGGCCTACACCATCACCGTCAAGGCCGACCG TTACGCTCGCCTGGGCGAGCTGAAGGATCAGGTCGTTGCCAAGCTGTCCGGTGAAGAAGGCCAGCCTTCTGCCAGCGACGTCAAAGCAGCATTCGGCGAA ATCGAATACCGCACCGTTCGCGAAAACATCGTTAACGGCAAGCCACGTATCGACGGTCGCGACACCCGCACCGTGCGTCCGCTGAACATCGAAGTCGGCG TTCTGCCGAAGACTCACGGTTCTGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTTGCGACCCTGGGTACTGCCCGCGACGCACAGCTGCTGGA CACCCTGGAAGGCGAGAAAAAAGACCCGTTCATGCTGCACTACAACTTCCCGCCGTTCTCGGTGGGCGAATGTGGTCGCATGGGTGGCGCCGGTCGCCGC GAAATCGGTCACGGCCGTCTGGCCCGTCGTTCGGTTCAGGCCATGCTGCCAGCCGCCGACGTGTTCCCGTACACCATCCGTGTAGTGTCGGAAATCACCG AGTCCAACGGTTCCAGCTCCATGGCTTCGGTCTGCGGTGCTTCCCTGGCACTGATGGACGCTGGTGTGCCGATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGCCTGGTCAAAGAAGGCGAGAAGTTCGCCGTCCTGACCGACATCCTGGGTGACGAAGACCACCTGGGCGACATGGACTTCAAAGTAGCCGGTACCGCT AAAGGTGTTACCGCGCTGCAGATGGACATCAAGATCAAAGGCATCACCGAAGAGATCATGGAAATCGCTCTGGGCCAAGCCCTGGAAGCGCGCCTGAACA TCCTCGGTCAGATGAACCAGATCATTGGTCAGTCCCGCACCGAACTGTCGGAAAATGCTCCGACCATGATCGCGATGAAAATCGACACCGACAAAATCCG TGATGTCATCGGTAAAGGCGGCGCGACCATTCGTGCGATCTGTGAAGAGACCAAGGCTTCGATCGATATCGAAGACGATGGCTCGATCAAGATCTTCGGC GAAACCAAGGAAGCTGCAGAAGCGGCGCGTCAGCGCGTTCTGGGCATCACTGCCGAAGCCGAGATCGGCAAGATCTACGTCGGTAAGGTTGAGCGCATCG TCGACTTCGGCGCATTCGTCAACATCCTGCCGGGCAAAGACGGTCTGGTTCACATCTCCATGCTGAGCGACGCTCGTGTTGAGAAAGTGACCGACATTCT GAAAGAAGGCCAGGAAGTGGAAGTGCTGGTACTGGACGTGGACAACCGCGGCCGTATCAAGCTGTCCATCAAAGACGTGGCAGCAGCCAAGGCTTCGGGC GCTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATACCCGCAGGCTTCACGCTGAAAAAAGGACTCTTCGGAGTCCTTTTTTTATGCGTGCAGGAAAATGCCGAAAAATCAGACGCTTAATCACAGCCAAAAG CCGCAACTTGCATGCAGGCACGCGCTGCTTCATGCAAATTGCACGAATCCGAAAATTCGCTCAATCTATAACTCTTTGTTTTTAAAGGGTTTATTTGCAG GCTTCGACTTGGCACAGTGCCTGCAACAGTCCTGTTAATGCTGCAGCATCAAGGTTCACACACTGCAGACTTTTAATAAAACAGGAGTTACTCGTATGAA GAAGTTCGCTCTCGCTACCGCAACTGCTACCGCCCTGACCCTGGCCATGGCCAACGTTGCCTTCGCTCAAACCGCGCAGGCGCCGATGACGCTGGCAGCT GGCGAAATGACCAAAGCCAAAGAGTCCACCTCGGACACTTGGATCACCACCAAAGTCAAAGCTGACCTGCTGACCGAAAAGGGCATCCCAGGTTCGGACA
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVVAGTSEAVLMVESEAKELTED QMLGAVLFAHDEFQVVINAVKELAAEAAKPTWAWAPQAEATELLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPAADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLTDILGDEDHLGDMDFKVAGTA KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG A
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site