Pseudomonas veronii 1YdBTEX2, H736_RS0113625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCGGGCGAACAAGGGCGCGGTTTTGCGGTGGTGGCCGATGAAGTCAGGCACCTGGCCAGCAACACCCAGAGCTCGGTCGAACAGGTGCGCAACGTGAT CGAGAGGTTGCAACAGCTGAGCCAGGAGGTGGTACACAGCACTCAACTGAGTCGCGAACAAGCCGGCAGCAGCGTGATCCAGGTGCAACAGACGCGTGCG GCGCTGCAGAACATCTCCCAGGCCGTGGACGTGATCGAGCAGATGAACCAACAGATCGCCAGCGCCGCCCTGGAACAAAGCACCGTCGTGGACGATATCA GCCAGCGTGTCAGCGACATCCGAGGCATCAGCGAAACACTCACCACGCGCATGAACGAGGCCTCCAGGGCCAGTGACTCACTGCATGAAATGGCCAACCA TCAACAGAACCTGGTGGGCCATTTCCGTGTGTGAGGGGCAATGCAGCGCAACTGAGCTACAGTGGCCGGCCTTCGACACTTTACACATAGAGCCTTGCCC
|
|
| DNA Sequence for Gene |
>H736_RS0113625
ATGACCGCTTCGCGACGCTGGTTGATCCTGGCCATTATTTCCAGTGCATTGCTGCTCATCGTGATTGACATGACCGTGCTGTACACCGCGTTGCCGACAC TGACGCGCGAGCTTGGTGCGACAGCGTCGCAGAAACTGTGGATCATCAATATCTATGCGCTGATCGCCGCCGGGCTGTTGCTGGGCATGGGCACGCTCGG CGACCGCCTGGGGCATAAACGGCTATTTATCGGGGGCTTGAGTGTATTTGGGCTGTGCTCGCTGATCGCGGCCTTCTCGCCTTCGGCCGGCGTATTGATC GGCGCGCGGGGGTTCCTGGCGGTCGGCGCGGCGATGATGATGCCCGCCACATTGGCCCTGGTCCGGTTGACGTTCACCGACGAGCGCGAACAGGCCATGG CGTTCGGGATCTGGGCCTCGGTGGCCTCGGGGGGCGCGGCGTTCGGGCCGGTGGTGGGTGGCCTGTTGCTGGAGCATTTCTGGTGGGGCTCGGTGTTTCT GATCAACGTGCCGATTGTGCTGCTGGCGTTGCTCGTCGGCGTGCTGTTGATCCCCGACCACCCGGGAAACCCCGAACGACGTTGGGATTGGCTGGGTTCG CTGCAGGTGATGATCGGCTTGATCAGCATGGCGTATGCCGTCAAGGAGCTCGGCAAACGGGTGCCCTCCTTCGAAGCCATGCTGGTGGCGGTGGTCCTGG GCACGCTGTTTCTCACGCTGTTCATTCGGCGCCAACGACGTGCCGCGCAGCCGATGCTCGATCTGTCGTTGTTCACCACATCCGGGTTCCGAAATGCGGT GATTGCGGCCGTGGTGTCAGCCGCCGCATTTATCGGCATGGAGCTGGTGTTCAGCCAACGCTTGCAACTGGTGCTGGGCCTGTCGCCGCTGGAAGCGGCA CTGTTCATTCTGCCGCTGCCGCTGGGTTCCTTTGTCGCCGGCCCGCTTGCCGGCTACTACCTGCCGCGCCTGGGCAACCAGCGCATGCTGTTCTGGACAT TGCTGCTTTCATCCGCCGCGATGCTGGCCTATGTGTTTCTGTACCAAGCCGCGGTGCCCCTGCAAATCGTCAGCCTGGCGCTGCTGGGCCTGACAATGGG CGCGGCACTGACCGCAGCGTCGAGCACCATCATGCTCAGCGTGCCCGCCGATAAGGCCGGCATGGCCGCGTCCCTCGAGGAAGTCTCCTTTGAACTGGGC GGTGCGGCGGGCGTGACGATTGCGGGCAGCCTGTTATCAGCGATCTATGCGTACTCGGCAGGGCGGGTGATTCCGTCATGGCTGACGCAAAACCCCGTGA CATTCGAGAGCCTCGACGACGCGCTGAACGTCGCCGGGACGTTATCACCCGAGGGCGCCGCCATGCTGACGGCGTTCGCCCGTTCGGCGTTTGATACAGG TTTCGTTGCCGTGCTGGCGACGATGACAGTCCTGTTGTTGATTGCGGCGCTGCTGGTGAAGCGGAGCCTGCCAGCAGCGGCGATCGTTACGGATGATCTG GCTTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGGCGCCTTGGCGTTATGCCCGCGCGCGCGCCCGCAGGATCGACGGTTCCTCCCCGCGATACAACGCCTCGACCTGGGACGCGCGCCACTGCAAGACCG CGCGCTGGTTGATCGAGCCCTTGTCGGTGATCTCGCCACGGTCGATGGACGCCGGTTCATCGAGCAGTACCAACCACTCCAGGCGACTTGCATTGCCCGT CGCGTCGCGATTGAGGCGTTGCAACCAGTCGCCAAACCACTGGCGCACGGCAGCGCTGGTCAGCACCTCGGCGTCGCTGGCGGCGGTGCCCAGCCCCGCC AGTCGGCGGCATTCGTACAGCCTTGGAAACACCAGAATGCCCAGGCATTCGCGGTCGGGCGCGGCGATCACCACGTCCTGCACATAGGGCCACCCCTCCA GGACCGCACGGTTGCGCAACGGCCCCACGCTGACAAACACCCCGGACGACAGTTTGAAATCCTCGGCGATGCGTCCGTCGAACATCAGGCCCAGGTGCGG
|
|
| Amino Acid Sequence |
>MFS transporter
MTASRRWLILAIISSALLLIVIDMTVLYTALPTLTRELGATASQKLWIINIYALIAAGLLLGMGTLGDRLGHKRLFIGGLSVFGLCSLIAAFSPSAGVLI GARGFLAVGAAMMMPATLALVRLTFTDEREQAMAFGIWASVASGGAAFGPVVGGLLLEHFWWGSVFLINVPIVLLALLVGVLLIPDHPGNPERRWDWLGS LQVMIGLISMAYAVKELGKRVPSFEAMLVAVVLGTLFLTLFIRRQRRAAQPMLDLSLFTTSGFRNAVIAAVVSAAAFIGMELVFSQRLQLVLGLSPLEAA LFILPLPLGSFVAGPLAGYYLPRLGNQRMLFWTLLLSSAAMLAYVFLYQAAVPLQIVSLALLGLTMGAALTAASSTIMLSVPADKAGMAASLEEVSFELG GAAGVTIAGSLLSAIYAYSAGRVIPSWLTQNPVTFESLDDALNVAGTLSPEGAAMLTAFARSAFDTGFVAVLATMTVLLLIAALLVKRSLPAAAIVTDDL A
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|