Pseudomonas veronii 1YdBTEX2, H736_RS0112745

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig18, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCGACGGCGAATTTAGGGGTGTTCGAGGCGATCACCTTGCCTACGCCCAGCGCCCGCATCACTTCGCCGATGCCGACGGGCGGAATGTAGGATTTGCCCT CATTCATCCAGCCGCGCATGGCCGGGTCGAGGGACAGGTATTCGTTGCGCACCAGCACCTGCCCGTCCTGTGGCGTGCCCACCGGCACTTCCTGGTAGGT GAAGGTCTCCCGCGTGGCCGCGCCGACCGGGCGTTTGGCGAGCAGGAACTGGCGGTTGGTCTGGGCAGTCATGGCAAGGACTCTTGAGAAATGAAGCCTG ATTGATAGACCCATACTGGCCTGCGGGCAAGGTCGGCCGAGGGCTGCGAATGCTTGGCGATAGGCTTCGATGATAGTCAGCCGGGCGGTCTTATCATTGT GATTCATGCAGCGCTAACCGGTCTTCTGATAGTGCTGACGCGCCCGTGTCGGGCTTGGCTAGACTCGGCCCACGGCTATTTCTCCCATAGGACATCCCCC
DNA Sequence for Gene
>H736_RS0112745
ATGAGCATGACGTTTTCCGGCCAGGTCGCCCTGGTCACCGGCGCCGCCGCCGGTATTGGCCGCGCCACCGCGCTGGCGTTTGCCGCCGAAGGTTTGAAGG TAGTGGTTGCCGACCTCGACGTAGCGGGCGGCGAAGGCACTGTCGCGCTGATCCGCGAGGCCGGTGGCGAGGCGCAGTTCGTGCGCTGCAACGTCACCCT GGAAGCCGATGTGCAGCAATTGATGGCGCAGACCATCGCCGCGTATGGCCGCCTGGACTACGCCTTTAACAACGCCGGGATCGAGATCGAGAAAGGCAAG TTGGCGGACGGCACACTCGATGAGTTCGACGCGATCATGGGCGTCAACGTCAAGGGCGTGTGGTTGTGCATGAAGTACCAATTGCCGTTGCTGCTGGCCC AGGGCGCTGGTGCGATCGTCAACACTGCGTCGGTGGCGGGGCTGGGCGCCGCGCCGAAGATGAGCATCTATGCCGCGTCCAAGCACGCGGTGATCGGCCT GACCAAATCGGCGGCCATCGAGTACGCGAAAAAGAACATCCGCGTCAACGCGGTATGCCCGGCCGTGATCGACACCGACATGTTCCGCCGTGCCTATGAA GCTGACCCGCGCAAAGCCGAATTCGCCGCGGCCATGCACCCGGTCGGGCGCATCGGCAAGGTCGAGGAAATCGCCAGTGCGGTGTTGTACCTGTGCAGTG ACGGTGCGGCGTTCACCACCGGCCACGCCCTGGCAGTGGACGGCGGCACCACCGCGATCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GACTCCAAGCCGCACCTCATTCGAAAAAGTTTGAGGTGCTGTGGGGCGTTTCCATAGCTGGCAAAATGCCGTGATCCAATGTGTATCAGGAGGTAAATAA GTCAATAAAATCAATACTTTAGTTACTGTTGGCGACCGGTTGGAGCGGGCTTCTGTGCTTAACTGTTTTGGGTTGAATAACAGATAGTTAAGTGAGTGGC TCATGGATTTAGGGATCGATCGACAAGCCCTTGTACCGGTGGTGCAGCAAATCGTCAGCGCGGTGGCGGAATGGATTCGCAAGAGCGGGGTCAGCCCCGG TACACGCTTGCCGTCCATCCGCCAACTGGCCCTCGACAACCTGCTCAGCCAGTCCAGCGTGATCGAGGCATTCGAGCGCATGGAGGCCCAGGGTCTGCTG ACCTCGAAGCAGGGCTCCGGGTTTGTGGTGGCGCAGCCTCCGGTGGCTCAGGAACGCCACTGGTATGAAGGCGCGGAGCGAGAGTGGGGCGCTTTCACCG
Amino Acid Sequence
>short-chain dehydrogenase
MSMTFSGQVALVTGAAAGIGRATALAFAAEGLKVVVADLDVAGGEGTVALIREAGGEAQFVRCNVTLEADVQQLMAQTIAAYGRLDYAFNNAGIEIEKGK LADGTLDEFDAIMGVNVKGVWLCMKYQLPLLLAQGAGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKNIRVNAVCPAVIDTDMFRRAYE ADPRKAEFAAAMHPVGRIGKVEEIASAVLYLCSDGAAFTTGHALAVDGGTTAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site