Pseudomonas veronii 1YdBTEX2, H736_RS0110760

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGATAGCGCAGGTAAAACTCGGGCAATGCGGGGACTAGAATCATGCTGGCCAGGGGGCTTGGCACATCCACTCGCAACCGCCCCCTGGGCAGTGTCGAG GCGCCGGACAGGCTGGTCTCGGCGTCGTCCATGTCGGCCAGCAGTCGTAACACTCGCTCGTAATAGACTGCACCGTCGGCCGTGACGTTGACTTTGCGCG TGGTGCGGTTAAGCAATTTAACCCGCAACCGTGCCTCCAACTGCTGTACCAGTTGTGTCACGGTGGTCTTGCTCATGTGCAGTGTTTCGGCCGCTTTGGT GAAGCTGCCAGCTTCCACCACGCGAGCAAACGCCTGCATCGCATCAAAACGGTCCATTGCTAACCCCCGCTCTCGATTGGATTGTTTGGATTTTACAAAC AGTGCTAGCTAGGGTTGCCTGTTTATCGCCCAGGTACAAGTCCATACAGTCTCTGCATCGTTAGTTCCGGGTCGGCTTTGACCCATTGATGGAGGCACCT
DNA Sequence for Gene
>H736_RS0110760
ATGACGCAGCGTGATGTTGTTTTTCCACCTGGACGCCAGGCGCTTTACGAGCGCAATCGCTATTCGCCGGCGATCAAGTCCAATGGTTTTTTATTTGTGT CGGGGCAAGTCGGCAGCCACGAAGACGGCTCGCCCGAACCCGATCTGGAGGCCCAGGTCCGACGCGCGTTCACCAACCTGAATGCAATCCTGGTCGCTGC CGGTTGCACCTTCGACGATGTGATTGACGTCACCGTCTTCATCGTCGATCCCGAGTCGACGTTCGAGACGATCTGGAAGGTTGTGCCGGAGTTCTGGGGC CGGGCGCCACACCCGACGCTGACCGGCGTGGGTGTCACGTGGCTGTATGGTTACCAGTTCGAGATCAAGGTGATTGCCAAGCTGCCGGAAGGCACCGGGG GATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCTGGCCAGTGATTACGCAAGGGCGCGGTACCGAAAGCGGTTCATCCTGAACCGTTGGGCTGTGACAGCGCGCACGTCACACCGCCGCAGTTGCAAGCGT TCTGGAACGCCAGGCAAAAGCCAACACCATCAGCAGCCCCAGCCCCGCCATTGCTGCTCCGGCCAGGGAAATCGCCGGATAACCCAGCCCGGCATTGATC ACCGCTCCGCCCAGCGCCGCACCAATCGCGTTGCCTAAGTTGAAGGCGCCGATGTTCACCGCCGAGGCCAGATTGGGCGCGTCCTTGGCCGCTTCCATGA CGCGCATCTGCAGCGGCGGCACCAGGGCGAAGCTGGCGATACCCCATATCAGGATGGCAACGGCGGCCGGCAGCGGCCAACGCATCAGTACGGTGAACGC GAGCAAGACGAGAATAAGCACGCTCAGCGAAACGATCAGGGTGCGATCTATCGAGCGGTCGGCGGCCTTGCCGCCCCACATGTTGCCCAGCGTCAACCCC
Amino Acid Sequence
>endoribonuclease L-PSP
MTQRDVVFPPGRQALYERNRYSPAIKSNGFLFVSGQVGSHEDGSPEPDLEAQVRRAFTNLNAILVAAGCTFDDVIDVTVFIVDPESTFETIWKVVPEFWG RAPHPTLTGVGVTWLYGYQFEIKVIAKLPEGTGG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site