Pseudomonas veronii 1YdBTEX2, H736_RS0109990

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig16, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGACCGTGAGCAATCGCCGATGTGTTGGTTCGCCGGCTATGACGGCGTGCGGACCAAGGCGTTTGTCGGCAAGTACTACCTCAGCGGCGACACCGTCGAA CTGAACCCGGACGGCAGCATCAGCTTCGTCGGGCGCAGTGACGATGTGATCACCACTTCCGGCTACCGCGTCGGCCCGTTCGATGTGGAAAGCGCGCTGG TCGAACACCCGGCGGTGGTGGAAGCGGCGGTCGTCGGCAAGCCCGACGCGGAACGCACCGAGCTGGTGAAAGCCTTCGTGGTGATCAACGAACAGTTCCG CGCCACCCCCGAGCTGGCCGAGGAATTGCGCCTGCATGTACGCCAGCGCCTGGCCGCGCATGCCTACCCGCGGGAAATCGAATTTGTCAGCGACTTGCCC AAGACCCCGAGCGGCAAGCTGCAGCGCTTTATTTTGCGTAATCAGGAAATCGCCAAGGCGCAAGCCGTGTTGGCCTGATCCACTTTTCAAGGAAACAACG
DNA Sequence for Gene
>H736_RS0109990
ATGCAGATTGCAAACAAGGTTTTTCTGGTCAGCGGCGGCGCGTCGGGCCTCGGCGCAGCCACCGCTGACATGCTGGTCGCCGCTGGCGCCAAGGTGATGC TGGTGGACCTCAACGCCGATGCCGTCGCGGCCAAGGCCAAACAACTGGGCGACAACGCCCGCAGCGCGGTGGCGGACATCAGCCAGGAAGCCGCTGCCGA AGCCGCCGTGCAGGCCACCGTTGCGGCCTTTGGGGGCTTGCACGGGCTGGTGAACTGCGCCGGTGTGGTACGTGGCGAGAAGATCCTCGGCAAGAACGGC CCCCATGGCCTGGCCAGCTTTGCCCAGGTGATCAACGTCAACCTGATCGGCAGCTTCAACCTGCTGCGCCTGGCCGCTGCGGCCATCGCAGAAACCCAGG CAGACGCCGACGGTGAGCGCGGCGTGATCATCAATACCGCGTCGGTAGCTGCGTTTGACGGGCAGATCGGCCAGGCGGCGTATGCTGCGTCCAAAGGTGC GATCGCCAGCCTGACCCTGCCCGCCGCGCGTGAATTGGCGCGCTTCGGCATTCGGGTGATGACCATCGCCCCCGGCATTTTCGAAACCCCGATGATGGCC GGCATGACCCCGGAAGTCCGCGATTCCCTGGCCGCTGGCGTGCCGTTCCCGCCACGCCTGGGCAAACCGAGCGAATACGCCGCGTTGGTTCGGCACATTA TTGAAAACAGCATGCTCAATGGCGAGGTGATCCGTCTCGACGGAGCCTTGCGCATGGCAGCCAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GAGAGGAAGCGTCATGAGTGATCCCATCGTAATTGTCAGCGCCGCACGCACCCCCATGGGCGGGTTCCAGGGCGATCTCAAAGGCCTGACCGCACCGCAA CTGGGCTCCGCGGCGATTCGCGCCGCCGTCGAGCGTGCCGGCATCGCCAGCGATGCCGTGGATGAAGTGCTGTTCGGCTGTGTACTGCCGGCCGGCCTCG GCCAGGCCCCGGCACGCCAGGCCGCGCTTGGCGCCGGGCTGGACAAGGCCACCCGCTGCACCACCCTCAACAAAATGTGCGGCTCGGGCATGGAGGCGAC GATGCTTGCCCATGACTCGCTGCTGGCCGGCAGCGTTGATGTGGTGATTGCCGGCGGCATGGAAAGCATGTCCAACGCGCCGTACCTGCTGGACCGCGCA CGCAGCGGCTATCGCATGGGCCACGGCCGCGTGCTCGACCATATGTTCCTCGACGGCCTGGAAGACGCCTACGACAAAGGCCGCCTGATGGGCACCTTTG
Amino Acid Sequence
>3-hydroxy-2-methylbutyryl-CoA dehydrogenase
MQIANKVFLVSGGASGLGAATADMLVAAGAKVMLVDLNADAVAAKAKQLGDNARSAVADISQEAAAEAAVQATVAAFGGLHGLVNCAGVVRGEKILGKNG PHGLASFAQVINVNLIGSFNLLRLAAAAIAETQADADGERGVIINTASVAAFDGQIGQAAYAASKGAIASLTLPAARELARFGIRVMTIAPGIFETPMMA GMTPEVRDSLAAGVPFPPRLGKPSEYAALVRHIIENSMLNGEVIRLDGALRMAAK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site