Pseudomonas veronii 1YdBTEX2, H736_RS0108440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig13, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAATTGGCGATTTTCGACGTTGACGGCGTGCTGACCGATGGCCGCCTGTACTTCCTCGAGGACGGCAGCGAATTCAAGTCGTTCAACACCCTCGACG GCCAGGGCATCAAGATGCTCATGGCGGCGGGCGTGCAAACCGCGATTATCAGCGGTCGGAAAACCCCGGTTGTGGAACGTCGCGCACAAAACCTGGGGAT TCCTCACCTGTATCAGGGCAGGGAGGATAAACTAGTCGTCCTGGACGAGCTTCTTGGCCAACTCAACCTAAGCTATGAGCAGGTTGCCTATCTGGGCGAC GACCTGCCCGACCTGCCGGTGATCCGCCGGGTGGGCCTGGGCATGGCTGTCGCCAATGCGGCGGCATTTGTTCGCGAGCATGCCCACGGCATCACCACGG CCCGTGGCGGCGAAGGCGCCGCCCGCGAGTTCTGCGAGTTGATCCTGCGTGCCCAGGGCAGCCTTGAAGCGGCCCACGCCGCCTACCTATAGAGCGTTTT
DNA Sequence for Gene
>H736_RS0108440
ATGCTGAGCAAAAAGATTCGCAACTTCCTGCTATTCGGGGTCATCGCCGCGCTGCTCCTGGCGGTTGGCTACTGGAATATCAGCCCGGAGCGCTTTCTCG ACCAGCCTGTGGCGCAGGTTGACCAAGGCGCTATCGACTATTACGCCACCAATGCCTACAGCGTGCAGTTCCTGCCCGATGGCAAGGTGCAGTATGAAAT GACCTCGGACAAGGTCGAGCACCTGAAAGCGTCCGAAGTCACCCTGCTGACCAACCCCGATTTGAATCTGTATCGCGGCACCGAATTCCCTTGGCACGTC ACCAGCAAGCGTGGCGAAGTCAACCCGGACGGCACCGAAGTAGAACTGATCGACTCGGTGCGCGTCGCACGGACCGACGCACAGAACCGCGACACCATCA TCACCAGCAGTCGCATGACCGTATTCCCACAGAAGCAATATGCGCAGACCGAGCAAGACGTTAGAATCGACGGCGCTGGCGGTGTATCGACTGGCAAGGG AATGAAAGCGTATTTGAAAGAAAGCAGGATACACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCAGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAGCAACCGATCCACATTTCGGCCGAC GATGCACAGCTCGATGACAAGCAAGGCGTCGCAACCTACACCGGCGGTGTGATCATTACCCAGGGTTCGATGAAGATCACCGGCAACACGGTGACGCTGA CTCGCACCCCTGCTGGCGACATTGACGTCGTGACCTCGGTGGGCAACCTGGCCTACTTCGAACAGAAGCAGTCTGCCACCGACACCGCCCCGATGAAGGG CTACGGTAAAACCATCCAGTATCACGCCCAGCAAAATCGCATCGTGCTGATCGACCAGGCCAAGGTACTCAGCCCCGACGGAAACTCCACGGAAGGTGAA AAAATCACCTATGACACCGTGAAGCAGGTTGCCAACGCCGGTCGCGCCAACGGCACCAAGGTGACTGCACCGCGTCCACGTATCGACATGGTTATCCAGC
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease LptC
MLSKKIRNFLLFGVIAALLLAVGYWNISPERFLDQPVAQVDQGAIDYYATNAYSVQFLPDGKVQYEMTSDKVEHLKASEVTLLTNPDLNLYRGTEFPWHV TSKRGEVNPDGTEVELIDSVRVARTDAQNRDTIITSSRMTVFPQKQYAQTEQDVRIDGAGGVSTGKGMKAYLKESRIHLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site