Pseudomonas veronii 1YdBTEX2, H736_RS0106020

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig9, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCGCGACGTGGAACGCCCGCCGCTGACCCTGGTGCCCGGCCAGGAAAAAGGCAAGGACATCGGCTGAAGGCCAGACCACGCCGCTCTTTGTGGTCGCTG TGGAGCCCCGGCGAGGCTCTACAGCGCCTCCAGCGGTTCTGCAGCATCAGGTTTGCCGCTCGTCGCCAATCGGTTTGCCCTGCAATCTCGATAAATGAGC CCTGGTTCACAAAACTCCTGCGAACTTTTCCGTCTTTCCCGGTACTAACCTAACTCGGCAATAACTTGATGGCCAAGTAGTGGCAATTAATAAGTTATTC GCTGAATCAACATCAAAATAGTTGCCGCTTGTCGGAATAATACTTCCGATGAGCGCTTGCTTATCTATTTTGATTATTTTTATGGTTATAAATCAGTGTG TTGCAGAACTATCTAGAACTTGCGTGCAACTAATCCAGTCCCTTGGGTCAGCCGAAGTTCGATGTTAGTTTGCCGCGCCTTGATTTTCGACGGATCGAAC
DNA Sequence for Gene
>H736_RS0106020
ATGTCTTTGTTATTGCCACGGACTCGGTATCTTCTGTGTACTTTGCTGCTCGCCTGGTTAAGCCTGAACAGCGCCACGGCCGCCCCCACGCCGGGCGATC AGGACCTGATCCGCGACCGCCAGAACCGCCTGCTCGACGAGCAGCGCCGGCGCCTTGACGAGCTCAAGGATCTGCCCGGCAAAGAAGCCAAGCCCCAGGC CCCGGCCACGCCCGCTGACAGCCGTTGCTTCCCGATCCGGGACATCACGCTCAAAGGCGCCGACAGCCTGCCCGCCACCGACCGCGAGCGCCTGCTCAAA CCCTATGTCGGCCAGTGCCTGGGCGTGTCGCAGCTCAATGAACTGCTCAAGGTCATCACCGATTACTACATCGACAAAGGCCGGGTCACCAGTCGCGCCT ACTTGCCGCAACAAGATCTTTCCAGCGGTCACCTCCAGGTGCTGGTGGTCGAAGGCAAACTCGAAGGACTCAAAGGCGCCCAAGGCAGCAGCGTGACCGA TCGCGAGCTGGCCATGGCCTTTCCCGGCAAGGTCGGCGAGGCGCTCAACCTGCGCGAAGTCGAGCAACTGGTGGACCAGCTCAACCGCCTGCCCTCCAAG CAGGCGCAAATGGAACTGACCCCCGGCACCCAGGTAGGCGGCAGTGACGTCGTGGTCAAGAACATCCCGCAAAAGCCCTGGCGCGCCAGCCTGTCGCGCA ACAACGACGGGCAGAAAAGCACCGGCGAACAGCAATGGGGCGCCGGCCTGGAGTGGGACAGCCCGCTCGGCCTGGCCGACCAACTGGTGCTGCGCGGCGG CCACGATGCCGTCAGCGACCACCAGAAAACCTCGAAAAACAGCATGCTCTACTACAACGTGCCGTGGGGCTGGTGGAACTTCAGTTACACCTACAACGAG AGCGACTACCGCACCTTTGGCGTGACCAACGACTACAAATTCAAGCAGAACGGCGACAACCAGAATCACCAGTTGCGCGCCGAGCGGGTGGTCCATCGTG ACGATGTGAGCAAGACATCGCTGAACGTCGGCGTGGCGCACCTGCGCACCAACAACTACATCCTCGATACCCGTACCGCCTCGAGCAGCAACCGCCTCAG CGAATTGCAACTGGGATTCAACCACGGGCGTCGCATCGGCAGCGGGTTCGTCAACGTTGACCTGGGCATGCAGAACGGCATCGGCTTGCTCGATGCCCAG GCCCAGGACGAGCGCGATGACGCAGGCAATCGGCAGCCCAACGCGCGCTATCGCAAATACACCGCCACCGCCAGCTTTCTGCAGCCGTTCACGCTGTGGG GCGAGTCGTTCAGTTTTTCCAGCCTGGCCACCGGCCAACGCAGTGAAGACATCCTGTTCAGCCCGCAGCGCATCAGCCTCGGCGGCTCGGCCTCGGTGCG CGGCTTCAAAGACCAGCAACTGAGCGGCGACAGCGGCGGCTACTGGCGCAACGACGTGCGCTGGGCGCGCCCGGTGACGCTCGATTGGCTGCGCCCGGCC TTTGCCGAATACGGCGCCAGCGTCGGCTACGACCAAGGTGTGATCAGCCACGGTCGCTACAACGACGACGTACACGGTCGGGGCTCGAGCAACTCCCTGG AGCTGTTCGCCCGGGGCAAACACGTCAGCACCAGCGTGACGTTTGCCCATTCTTTGGAACGCCCGGCAGTGATGAGCGAGCGCGAAGCGCCGATCTACTT CCGCATGGATTTCTTCCTGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCAACGCCCCGTTACATCGAGAATTTGAAAATGGATGTTCGCCAATTTGCCTTCCTGGCCCGCCAACCTTCTGCCGCCCTGAAGCCGCGCGACGCGTTC TTCGGCCTGCCCAAGCGCGGGCTGGCATTGATCCTCGCCAACGCGCTGTTTTGGCAGCCGCTGCTGGCCCAGGCCGAGGGCATCGTGGTCAGCGCGCCCG GCACCACCGTCGGCGCCGCGGGCAATGGCGTGCCGGTGGTGAACATCGCCACACCGAACGGCAGTGGCCTGTCGCACAACCAGTTCAAGGACTACAACGT CGGCCCCAACGGCGTGATCCTCAACAACGCCAGCGGCGCGGTGACCAACACCCAACTGGGCGGCTACATCGTCGGCAACCCCAACCTCAAGGGCGGCGCG GCCAGCGTCATCCTCAACGAAGTCAACGGCGGCAACCCCAGCCAGTTGCGCGGCTACACCGAAGTAGCGGGTCAGTCGGCCAAGGTCATCGTCGCCAACC
Amino Acid Sequence
>ShlB family hemolysin secretion/activation protein
MSLLLPRTRYLLCTLLLAWLSLNSATAAPTPGDQDLIRDRQNRLLDEQRRRLDELKDLPGKEAKPQAPATPADSRCFPIRDITLKGADSLPATDRERLLK PYVGQCLGVSQLNELLKVITDYYIDKGRVTSRAYLPQQDLSSGHLQVLVVEGKLEGLKGAQGSSVTDRELAMAFPGKVGEALNLREVEQLVDQLNRLPSK QAQMELTPGTQVGGSDVVVKNIPQKPWRASLSRNNDGQKSTGEQQWGAGLEWDSPLGLADQLVLRGGHDAVSDHQKTSKNSMLYYNVPWGWWNFSYTYNE SDYRTFGVTNDYKFKQNGDNQNHQLRAERVVHRDDVSKTSLNVGVAHLRTNNYILDTRTASSSNRLSELQLGFNHGRRIGSGFVNVDLGMQNGIGLLDAQ AQDERDDAGNRQPNARYRKYTATASFLQPFTLWGESFSFSSLATGQRSEDILFSPQRISLGGSASVRGFKDQQLSGDSGGYWRNDVRWARPVTLDWLRPA FAEYGASVGYDQGVISHGRYNDDVHGRGSSNSLELFARGKHVSTSVTFAHSLERPAVMSEREAPIYFRMDFFL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site