Pseudomonas veronii 1YdBTEX2, H736_RS0104985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas veronii 1YdBTEX2 Contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCGGCTTGATGCAGCCGTGGCGTTTTATCCGCATCAGCGACCGCCTATTGCGTGGGCGGATTCAACAGTTGGTGGAGGAAGAACGCATACGCACCGCCG AGGCCTTGGGCGAGCGTTCCGATACGTTCATGAAGCTCAAGGTCGAAGGCATCCACGACTGCGCCGAAGTGCTGGTGGCGGCGCTGATGGATGAGCGCGA GCGCCATATCTTCGGCCGGCGTACCTTGCCGGAAATGGACATGGCCTCGCTGTCCTGCGCGATCCAGAATCTGTGGCTGGCCGCGCGGGTCGAAGGCCTG GGCATGGGCTGGGTGTCGCTGTTCGAACCGCAGGCCCTGGCCGACCTGCTGGGCTTGCCGCCCGGCGCGAAACCCTTGGCGGTATTGTGCCTGGGGCCGG TCGAGGCGTTCTATCCGGCACCGATGTTGCAGCTCGAAGGCTGGGCGGAACCGCGCCCGCTGAGTGACATGTTGTATGAAAATACCTGGGGAGTGCGTCA
DNA Sequence for Gene
>H736_RS0104985
ATGAGTGTGGCCTTGCTGTGTGTCGCTGCGGTGGCGCTGGATGCGCTGCTGGGCGAGCCCAGGCGCTGGCATCCGCTGGTGGCGTTCGGCAACTTCGCCG CGCGCATCGAGCAGCGTTTCAACAGCGGTGGCCGTGGCTGGCGCAGCCACGGCGTGACCGCCTGGTTTATTGCGGTGGTGCCGTTGACGCTGTTGGCCAC CGCGTTGTCGTGGGCGCCTTATATCGGCTGGGTGCTGGAGATCCTCGCGCTGTACTGTGCCCTCGGCATGCGCAGTCTCGGCGAGCACGTGATCCCGGTG GCCCAGGCCCTGCGCGGCGATGACCTGGACGAAGCCCGGCGGCGCGTGAGTTACCTGGTGAGTCGCCAGACCAGTGAACTGGATCGCACTGAAGTCGCTC GTGCCGCCACCGAATCGGTGCTGGAAAACGGCAGCGACGCGGTGTTTGCCGCACTGTTCTGGTTTGTCGTCGCGGGTGTGCCGGGCGTGGTGCTGTACCG CTTGAGCAACACCCTCGACGCCATGTGGGGCTATCGCAACGAACGCTTCGAGCGTTTCGGATGGGCGGCGGCCAGGATCGACGATGTACTGAACTATATT CCGGCACGCCTGGTGGCGTTGACCTACGCCGTACTCGGTAAAACCAGGCTGGCCATCAAATGCTGGCGCCGTCAGGGCCCGACCTGGGACAGCCCCAACG CCGGTCCGGTGATGGCGGCGGGGGCAGGTGCCTTGGGCGTCGAGTTGGGCGGTGCCGCGATCTATCACGGTGAGCTGCACCAGCGTCCGCCACTGGGCGA AGGCCCGGCGGCGGATGCGGACGCCATCGACCGCGGCTGGCAACTGGTGCAGCGCGGCGTATGGTTGTGGCTGCTGATCCTATGCGTCGGGGGGCAATTG TATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGGTGGCCGGCTGCGTAAGGCGGCGATTGAATATGGGATTGCCGAGGCCGAATGGCTCGACCTGTCCAGCGGCCTGGCGCCCTGGCCGTGGCCGGTC CCCGAAATTCCGTTGCGCGCCTGGGCGCGTCTGCCGGAAACCGACGACGGTCTGGAGCAAGCCGCCAGCGAATACTACGGCACCGCGCATTTATTGCCGG TGCCGGGTTCCCAGGCGGCGATCCAACTGCTGCCGCGCTTGCGCCGGGGCGGCAAGGTCGGCGTGCTGTCACCTTGCTATGCCGAGCACGCCGAGGCCTG GCGTCGCGCCGGCTACGTGGTGCGCGAAGTGCAGGAGCAGGAGGTCGACTTCTTTCTCGACAGCCTGGACGTGCTGGTGGTGGTCAACCCGAATAACCCC ACGGGCCTGAGCCTGACCCCGCAACGGCTGCTCGATTGGCATGCGCGGCTGGCCCAGCGCGGCGGTTGGCTGGTGGTGGACGAAGCTTTCATGGACGTCA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLCVAAVALDALLGEPRRWHPLVAFGNFAARIEQRFNSGGRGWRSHGVTAWFIAVVPLTLLATALSWAPYIGWVLEILALYCALGMRSLGEHVIPV AQALRGDDLDEARRRVSYLVSRQTSELDRTEVARAATESVLENGSDAVFAALFWFVVAGVPGVVLYRLSNTLDAMWGYRNERFERFGWAAARIDDVLNYI PARLVALTYAVLGKTRLAIKCWRRQGPTWDSPNAGPVMAAGAGALGVELGGAAIYHGELHQRPPLGEGPAADADAIDRGWQLVQRGVWLWLLILCVGGQL YA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site