Pseudomonas veronii 1YdBTEX2, H736_RS0104885 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig7, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGCGGTGGAAGGCGTGCAGGCCATGGTCGAGCGTGCGGCGCTGAATGCCGTCAGCAATAATTTGCATAATGTGCAGTTTTTTCAGGCTGATTTGTCCC AGTCGTTGACTGACGCGGAATGGGCCAAACAGGGCTTTTCTGCGGTACTCTTGGACCCACCTCGCGACGGTGCCCTGGAGGTTGTGCGCAAGCTCGCCAG CCTGGGGGCCAAGCGCCTGGTGTACGTGTCCTGCAATCCGGCGACGCTGGCGCGGGACACGGTTGAGTTGGTCAAGCAGGGTTACCGGCTAAAACGTGCC GGGATCCTCGACATGTTTCCGCAAACCGCGCATGTCGAGGCGATGGCGTTATTTGAGGCGGGCTAGGATGCCCGTTTAATCCGACTGGCCTGCACTCTCC TGGGCCGTGACCTGCCAGGGAGTGTGTGAGCTTTAGTGATAAAGCAGGTCAGCGATGATTTTTGGCGCATCGAAGGTGCGTCGTAGGGAAGGTAAGCAAG
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| DNA Sequence for Gene |
>H736_RS0104885
|relA
ATGGTACAGGTGAGAGCACACCAGCCGATCAACACCGACGGCAGTATCAATCTCGAGGCATGGCTGGATCATGCCATCAGTGTCGACCCGGCACTGGACC GTGAAGCCTTGAAAGCAGCCTGCGAGTTCGCTCGTGAGTCTGAACAGCAAGACAATGCGGCCAAGAACCTGTGGGCCGAAGGCACTTCGAGCTTTCGCAC CGGCTTGGAAATCGCTGAGATCCTCGCCGATCTCAAGCTCGACCAGGATTCACTGATCGCTGCCGTGCTCTATCGCGGCGTGCGTGAAGGGCATATCCCG TTGGCCACCGTGGGCCAGCGCTTCGGCTCCGTGGTGGCCAAGCTGATCGACGGCGTGCTGCGCATGGCCGCCATCAGCGCCAGCCTCAGCCCGCGCCAGT CCATGGTGCTGGGCACCCAGGGCCAGGTGGAAAACCTGCGCAAGATGCTGGTGGCGATGGTCGACGACGTGCGCGTCGCCTTGATCAAGCTGGCCGAACG CACCTGCGCGATCCGAGCGGTGAAAACCGCCGACGACGAAAAGCGCAACCGCGTGGCCCGCGAAGTCTTCGACATCTACGCACCGCTGGCGCATCGCCTG GGCATCGGTCATATCAAATGGGAGCTGGAGGACTTGTCCTTCCGCTACCTCGAACCCGACCAATACAAACAGATCGCCACGCTGCTGCATGAGCGCCGGC TCGACCGCGAGCGTTTCATCACCGACGTGATGGGCCAGCTGCGCGCCGAGTTGCAGGCTACCGGCGTCGACGCCGACATCAGCGGCCGCGCCAAGCACAT CTATTCGATCTGGCGCAAAATGCAGCGCAAGGGCCTGGCCTTCAGCCAGATCTACGACGTGCGCGCCGTGCGCGTGCTGGTGCCGGAAATGCGCGACTGC TACACCGCGCTCGGTATCGTCCACACCCTGTGGCGGCACATCCCCAAGGAGTTCGACGACTACATCGCCAACCCCAAGGAAAACGGCTATCGCTCGCTGC ACACTGCAGTGATCGGCCCCGAGGGCAAGGTGTTGGAAGTGCAGATCCGCACCCACGCGATGCACGAAGAGGCGGAGCTGGGGGTGTGCGCGCACTGGCG CTACAAGGGCACCGACGTCAAGGCCGGGTCCAACCAGTACGAAGAGAAGATCTCCTGGCTGCGCCAAGTGCTGGAGTGGCACGAAGAACTCGGCGACATC GGCGGCCTGGCCGAACAACTGCGGGTGGATATCGAGCCGGACCGGGTCTACATCTTCACCCCCGACGGCCACGCCATCGACCTGCCGAAGGGCGCCACGC CGCTGGACTTCGCCTACCGCGTACACACCGAGATCGGCCACAACTGCCGGGGCGCCAAGATCAACGGGCGCATCGTGCCGCTCAACTACAGCCTGCAGAC CGGCGAGCAGGTCGAGATCATCACCAGCAAGCACGGCACGCCGAGCCGCGACTGGCTGAACCCGAACCTGGGTTACATCACCACCTCGCGGGCGCGGGCG AAGATCGTCCACTGGTTCAAGCTGCAGGCGCGCGACCAGAACGTCGCCGCCGGCAAAAGCCTGCTCGAACGCGAACTGGCGCGCCTGGGCCTGCCTCAGG TGGACTTCGACAAGCTGGCCGAAAAGGCCAACATGAAGATCGCCGAAGATATGTTCGCCGCCCTCGGTGCCGGCGACCTGCGCCTGGCGCAACTGGTCAA CCTGGCCCAGCAACTGGTGGAGCCGGAGCGCGGCAACGAACAGCTGGAACTGATCCCGCGCAAAGCCACCGGCTACAAGCCCGGCAAGCGTGGCGATATC CAGATCCAGGGCGTCGGCAACCTGATGACGCAAATGGCCGGTTGCTGCCAGCCGCTGCCGGGCGACGCCATCGTCGGCTACATCACCCAGGGCCGTGGCG TGAGCATTCACCGCCAGGACTGCGCCTCGGTGCTGCAACTGGGCGGGCGCGAGCCGGAGCGGATCATCCAGGTCAGCTGGGGCCCGGTGCCGGTGCTCAC CTATCCGGTGGACATCATCATCCGTGCCTACGACCGTTCCGGTCTGCTGCGCGACGTGTCGCAAGTGTTGCTCAACGAGCGGATCAACGTGCTGGCCGTC AACACCCGCTCGAACAAGGAGGACAACACCGCGTTGATGTCCCTGACCATCGAGATTCCGGGGCTGGACGCGTTGGGGCGGTTGCTGGGGCGGATTTCCC AGTTGCCGAACATCATCGAGACGCGGCGCAACCGTACCCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATCTGGATGAACACAGTCTGAAAGGTGGGAGGGGGCTTGCCCCCGANAGCGGAGTGTCAGGTACCAGATTCTTGGTTGATCCACCGCAATCGGGGGCA AGCCCCCTCCCACAGTTGATCGGCGGTGTTCATACCTGATCGGGAATAGAAAGATGTATTCACTTGAAGACCTGCTGCACCTGATGAATCGCCTGCGCGA CCCGCAATACGGGTGCCCGTGGGACATCAAGCAAACCTACGCGAGCATCGTCCCGCACACCCTGGAAGAGGCCTACGAAGTCGCCGACGCCATCGAGCGC GGCGACTTCGATCACCTGCAAGGCGAGTTGGGCGACCTGTTGTTCCAGGTGGTGTATTACAGTCAGCTGGCACAGGAAGAAGGGCGCTTCGAGTTCGCCG GGGTGATCGACAGCATCACCCGCAAGCTGATTCGACGTCATCCCCATGTGTTCCCCACCGGCGATCTGTACGCGCCGCTGGATATCCCGCAGTTGAGCGA
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| Amino Acid Sequence |
>(p)ppGpp synthetase
MVQVRAHQPINTDGSINLEAWLDHAISVDPALDREALKAACEFARESEQQDNAAKNLWAEGTSSFRTGLEIAEILADLKLDQDSLIAAVLYRGVREGHIP LATVGQRFGSVVAKLIDGVLRMAAISASLSPRQSMVLGTQGQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKTADDEKRNRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPDQYKQIATLLHERRLDRERFITDVMGQLRAELQATGVDADISGRAKHIYSIWRKMQRKGLAFSQIYDVRAVRVLVPEMRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHAMHEEAELGVCAHWRYKGTDVKAGSNQYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYIFTPDGHAIDLPKGATPLDFAYRVHTEIGHNCRGAKINGRIVPLNYSLQTGEQVEIITSKHGTPSRDWLNPNLGYITTSRARA KIVHWFKLQARDQNVAAGKSLLERELARLGLPQVDFDKLAEKANMKIAEDMFAALGAGDLRLAQLVNLAQQLVEPERGNEQLELIPRKATGYKPGKRGDI QIQGVGNLMTQMAGCCQPLPGDAIVGYITQGRGVSIHRQDCASVLQLGGREPERIIQVSWGPVPVLTYPVDIIIRAYDRSGLLRDVSQVLLNERINVLAV NTRSNKEDNTALMSLTIEIPGLDALGRLLGRISQLPNIIETRRNRTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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