Strain | Pseudomonas veronii 1YdBTEX2 Contig7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCGTTCTACGGCATGTCGACCTTCGAAGGGCCGATGATGGCGATCAAGACCGTCAACTCGCTGTCGCACTACACCGACTGGACCATCGGCCACGTAC ACGCCGGCGCGCTCGGCTGGGTAGCGATGATCTCCATCGGCGCGCTGTACCACATGATCCCGAAAATCTTCGGGCGTGCGCAGATGCACAGCGTTGGGTT GATCAATACGCACTTCTGGCTGGCCACCATCGGCACCGTGCTCTACATCGCCTCGATGTGGGTCAACGGCATTACCCAAGGCCTGATGTGGCGTGCGATC AACGATGACGGCACCCTCACCTACTCCTTCGTCGAAGCGCTGCAAGCCAGCCACCCGGGCTACATCGTCCGTGCCCTGGGCGGCGCGTTCTTTGCCTCCG GCATGCTGTTCATGGCCTACAACGTCTGGCGCACCGTGCGTGCCTCCGACCCAGCAGAAGCCGAAGCCGCCGCCAAGATCGCCGTTGTGGGAGCCCACTG
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DNA Sequence for Gene |
>H736_RS0104625
ATGAAGCACGAAGTAGTCGAGAAGAATATCGGCCTGCTGGCCTTCTTCATGGTCATCGCCGTGAGTATCGGCGGCCTGACCCAGATCGTTCCGCTGTTCT TCCAGGACGTGACCAACAAGCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTTGAACTGGAAGGCCGCGACATCTACATCGCCAACGGCTGTGTCGGCTG CCACTCGCAGATGATCCGTCCGTTCCGCGCCGAAACCGAACGTTATGGCCACTACTCTGTGGCCGGTGAAAGCGTGTGGGACCACCCGTTCCTGTGGGGT TCCAAGCGCACCGGGCCGGACCTGGCCCGTGTCGGCGGACGCTACTCCGATGACTGGCAACGCGCGCACTTGTACAACCCGCGCAACGTTGTGCCTGAGT CGAAAATGCCGGCGTACCCGTTCCTCGTGGAAAACAAGCTCGACGGCAAGGACACCGCGAAGAAGATGGAAGTCTTGCGCACCCTGGGCGTGCCCTACAC CGACGAAGACATCGCCGGTGCAGCCGCAGCCGTGAAGGGCAAGACCGAAATGGACGCATTGGTGGCCTACCTGCAAGGCCTTGGCACCATCATCAAAAGC AAACGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCTTCATGGATATCGGGATGATTCGTGGCCTGGGCACCGTTGTCGTGATGGTGGCCTTTATCGGCCTGGCGCTGTGGGTGTTCAGCCCCAAGCGCAAGT CGGAGTTTGACGACGCAACCATGCTGCCCTTTGCGGATGACCCCGAAGCCATCAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACTACGTTC TGGAGTCTGTACGTCACAGTCCTCAGTCTGGGTACCATTTTCGCCCTGACCTGGCTGCTGCTGTCGACCCGCAAGGGCCAGCGCGCCGAGCAAACGGACG AGACCGTCGGCCACTCGTTCGACGGTATCGAGGAGTACGACAACCCACTGCCGAAATGGTGGTTCATGCTGTTCGTCGGCACCATCGTCTTCGCCCTCGG CTACCTGGTGCTATACCCCGGCCTGGGCAATTGGAAAGGCCTGCTGCCGGGCTACAACTACCTCGACAACGACAAGCAGACCGCCTTCGCCAACGGCCAG
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Amino Acid Sequence |
>peptidase S41
MKHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDIYIANGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWG SKRTGPDLARVGGRYSDDWQRAHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGKTEMDALVAYLQGLGTIIKS KR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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