Strain | Pseudomonas veronii 1YdBTEX2 Contig6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCAAGCTGCTGCTGGCCGGCCAGGATCTGGCCACCATCAGCAATGCGCAGATTCCGTTCCTGCGCCGCCAGATCGGCGTGGTGTTCCAGAACCACCAGT TGCTGTTCGATCGCACGGTGTTCAATAACATTGCGTTGCCGTTGCAGATCCTTGGGCTGTCCAAGGCCGAAATCATCAAGCGCGTGGACTCGGCGCTGGA GCGCGTGGCGTTGTCGGACAAGACCGACCTCTACCCCGGCGACCTGTCCACCGGCCAGCAACAGCGCGTCGGCATCGCCCGCGCCATCGTCCACCGCCCG GCCTTGCTGCTGGCGGACGAACCCACCGGTAACCTCGACCCGCGCCTGGCGGCCGAGATCATGGGCGTGTTCGAAGACATCAACCGCCTGGGCACCAGCG TGCTGATCGCCAGTCACGACCTGGCACTGATCGCGCGCATGCGCCATCGCATGCTGACCCTGCAACGCGGTCGCCTGATCGGCGACGGGGAGGCTGGCGT
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DNA Sequence for Gene |
>H736_RS0103395
ATGAGTGCGACACGCAGCCCCAAGGTTTCCGAGCGTGTGGCGCCGAAACCGGCCGACCCGCAACCGAAAAAGAAAAAACACGACGAAGACGACGGCCCGG ATTTCGCCACGCTGCTGCGTGCCTGGATCGAAAGCCATCGTGCCAGCCTGCTCGACAGCCTGCGTCGCCTGGGCAAGCAGCCGATCGGCAGCTTTTTCAC CTGCCTGGTGATGGCCGTGGCCTTGAGCCTGCCCATGGGCTTGTCGCTGCTGCTTAATAATGTGGAGCGCCTGGGCGGTTCCTGGCAGCGCGCCGCGCAG ATTTCGCTGTACCTGAACCTGGATGCCAGCGCCAAAGACGGCGAGGCCCTGCGCGAAGAGATCAAGAACCTGCCGGGCGTGGCGGATGCCGAGTACATCA GCCGCGATCAGGCCCTCGAGGAATTCCAGCAACAGTCCGGCCTGGGCGAAGCGCTCAAGGAGCTGCCGCAGAACCCGCTGCCGGGCGTGGTGCTGGTGAC GCCGAATGAAGTCGACAAACCGGCCCTGGAAGCCCTGCGACAAAAACTCGCAGAGATGCCCAAGGTGCAACAGGCGCAACTTGATCTAGTCTGGGTAGAG CGCCTGGCGGCGATCCTCAAGCTGGGCGACCGCTTTGTGTTCGGCCTGACGGTGTTGTTGGTGTCTGCATTACTTTTGGTGATAGGTAATACCATTCGTC TTCATATTGAAAACCGTCGCACCGAGATAGAAGTGATTAAACTGGTCGGCGGCACGGACAGCTATGTGCGTCGTCCTTTTCTGTACATGGGCGCGCTTTA TGGCTTCGGTGCGGGGATTTTGTCCTGGGGCTTGTTGGCGTTCGGCCTGGACTGGCTGAACGACGCGGTCATCGGGCTGGCCGGCTTGTACGGCAGTGAT TTCGCATTGGCCGGGGTGCCGGTCGCCGATGGTCTGTCGCTCTTGCTTGGCGCGGTCTTGTTGGGGTATATCGGTGCGTGGATTGCGGTCGCACGGCATT TACGTGAGCTGGCACCGAAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTAATGTCAGATTAATGTGGTTTCGTTTGTATTGACCGTATCAGTGGTTTAGGGAACTTGTCCTACGGTTCCCGGTCAATTTTCGCAGTGCTGAACTGCA CGAGTTATGTGAGTCGGAGGTTTTTTCGTATGACCACTTCTTTGCAACCTGTTTATGCCTTGGTCCCGGGTGCGAACCTGGAGGCCTATGTGCACACGGT CAACAGCATTCCATTGCTGACGCCGGAGCAGGAGCGTGAACTGGCCGAGAGTCTCTACTATGAGCAGGATTTGGGGGCGGCTCGGCAGATGGTGCTCGCC CACCTGCGTTTTGTCGTACATATCGCCCGTAGCTATAGCGGCTACGGCCTGGCCCAGGCTGACCTGATCCAGGAAGGCAACGTCGGCCTGATGAAGGCAG TGAAGCGCTTCAACCCGGAAATGGGTGTGCGCCTGGTGTCGTTCGCTGTTCACTGGATCAAGGCGGAAATCCACGAGTTCATCCTGCGCAACTGGCGCAT
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Amino Acid Sequence |
>cell division protein FtsX
MSATRSPKVSERVAPKPADPQPKKKKHDEDDGPDFATLLRAWIESHRASLLDSLRRLGKQPIGSFFTCLVMAVALSLPMGLSLLLNNVERLGGSWQRAAQ ISLYLNLDASAKDGEALREEIKNLPGVADAEYISRDQALEEFQQQSGLGEALKELPQNPLPGVVLVTPNEVDKPALEALRQKLAEMPKVQQAQLDLVWVE RLAAILKLGDRFVFGLTVLLVSALLLVIGNTIRLHIENRRTEIEVIKLVGGTDSYVRRPFLYMGALYGFGAGILSWGLLAFGLDWLNDAVIGLAGLYGSD FALAGVPVADGLSLLLGAVLLGYIGAWIAVARHLRELAPK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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