Strain | Pseudomonas stutzeri TS44 Contig00035, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGGCGCGCAACCTCAACGGTCGCGCGATTCTGTATGCCGACAACATCACCGGTTCGATGCAGCGCGCGATGGATGAAACCGAGCGGCGGCGCAACAA GCAGATCGCCTTCAACGAGGCCCACGGTATCGTGCCCAAGGGTGTCAAGAAGGATGTGCAGGACATTCTCGAAGGCGCCACCGTGCCCGGCTCGCGCAGC CGCAAGCGGCGCAGCGAAGCCAAGGCCGCGGAGGAGATCGCACGCTACGAGAACGAGCTGCGTTCGCCGAGCGAGATCACCAAGCGCATCCGCCAGTTGG AAGAGAAGATGCTGAGCCTGGCGCGCGACCTGGAGTTCGAGGCCGCCGCCGAGGCCCGCGACGAGATCCACAAGCTGCGCGAGCGTCTGCTGCAGGTCTA GTGGGCGCCGGCGCCTGGGGCGAACTGGAGCAGCCGGCGCCGCGCCTGCTAACATTCGCGCCTTCGATTTTTCCGTCCGTCCTTTCGTTCGAGAGCTTCC
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DNA Sequence for Gene |
>YO5_20201
|gltX
ATGACCACGGTCCGCACCCGCATCGCGCCATCTCCGACCGGCGATCCACACGTCGGCACTGCCTATATCGCGCTGTTCAACCTGTGCTTCGCGCGTCAGC ACGGCGGCCAGTTCATCCTGCGCATCGAGGACACCGACCAGGTGCGCTCGACCCGCGAATCCGAGCAGCAGATCTACGACGCATTGCGCTGGCTGGGCAT CGAATGGGACGAGGGTCCGGACGTTGGCGGCCCGCACGGTCCGTACCGGCAGAGCGAGCGCGGCGCGATCTACCAGAAGTACTCGGACGAGCTGGTCGCC AAGGGCCACGCCTTCCCCTGCTTCTGTTCCGCCGAGCGTCTGGATGCGGTGCGCGCCGAGCAGATGGCCAACAAGGAAACCCCGCGCTACGACGGTCACT GCATGCACATCGCGGCGGAAGAGGCGCAGCGTCGCGTCGCTGCCGGCGAGTCGCACGTGGTGCGCATGAAGGTGCCGGAAGAGGGCACCTGCGTGGTCAA GGACATGCTGCGCGGCGAGGTCGAGATCGGCTGGGACCGCATCGACATGCAGGTGCTGATGAAGGCCGACGGCCTGCCCACCTACTTCCTCGCCAACGTG GTCGACGACCACCTGATGGGCATCACCCACGTGCTGCGCGGCGAAGAATGGCTGCCGTCCGCGCCCAAGCTGCTCAAGCTGTACGAGTATTTCGGCTGGG AAGCGCCGGTGAACTGCTACATGCCGCTGCTGCGCAACCCGGACAAGAGCAAGCTCTCCAAGCGCAAGAACCCCACCTCGATCACCTTCTACCAGCGCAT GGGCTTCCTGCCGCAGGCGATGCTCAACTACCTGGGGCGCATGGGCTGGTCGATGCCGGACGAGCGCGAGAAATTCACCCTCGACGAGATGATCGAACAC TTCGACATCCTACGTGTATCGCTGGGTGGGCCGATCTTCGATCTGGAAAAACTCTCCTGGCTCAACGGCCAGTGGCTGCGCGAGCTGCCGGTCGAGCGCT TCGCCGAAGAAGTGCAGAAATGGGCGTTCAATCCCGGCTACCTGATGCAGATCGCTCCGCACGTGCAACAGCGCGTGGAGACCTTCAGCCAGATCGCCCC GCTGGCCGGGTTCTTCTTTTCCGGCGCGCTGCACCTCGATGGCGCGCTGTTCGCGCACAAGAAACTGGATGAAGCCCAGGTGCGCCAGGTGCTGCAGCTG ATCCTCTGGAAGCTGGAGGCGCTGCGGCACTGGGAGAAGGAGCGCATCACCGGCTGCATCACGCAGGTCGCCGAACACCTGGGCCTCAAGCTGCGCGATG TGATGCCGCTGATGTTCGCGGCGATCACCGGGCAGGCCAGCTCGGTGTCGGTACTCGATGCCATGGAAATCATCGGGCCGGACCTGACCCGTTTCCGTCT GCGCAACGCACTGGAGCTGCTTGGCGGCGCGTCGAAGAAAGAAGCCAAGGAGTGGGAGAAGCTGCTCGCGACGATCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGCTCCGACGGCTCGAGACCGCGCCGCGTTCCCGGGCGCGGCGTGGAATGGCACTGGCGTGGCGCCATTCGTCGGCGATAAGTAATTGTTCCTGCTGCC AAAAACTTCGGGGTTGCGGTCGAAAATAATGTTGACACTGCCCGGGGGCGCCCCTAATATGCGCCCCGTCCTCGAGATGGGGCTATAGCTCAGCTGGGAG AGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATCCCGTCTAGCTCCACCAATCTCGATTGCCACACCGATCATTTGATCGGTCGCCTTTGAAGGGC TTGCGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCACTTTCCAGCTGTCGCACGTT GTGCGGCACACGTCGCGAGACGCTAAATCCGGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATCCCGTCTAGCT
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Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQVRSTRESEQQIYDALRWLGIEWDEGPDVGGPHGPYRQSERGAIYQKYSDELVA KGHAFPCFCSAERLDAVRAEQMANKETPRYDGHCMHIAAEEAQRRVAAGESHVVRMKVPEEGTCVVKDMLRGEVEIGWDRIDMQVLMKADGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLLKLYEYFGWEAPVNCYMPLLRNPDKSKLSKRKNPTSITFYQRMGFLPQAMLNYLGRMGWSMPDEREKFTLDEMIEH FDILRVSLGGPIFDLEKLSWLNGQWLRELPVERFAEEVQKWAFNPGYLMQIAPHVQQRVETFSQIAPLAGFFFSGALHLDGALFAHKKLDEAQVRQVLQL ILWKLEALRHWEKERITGCITQVAEHLGLKLRDVMPLMFAAITGQASSVSVLDAMEIIGPDLTRFRLRNALELLGGASKKEAKEWEKLLATIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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