Pseudomonas stutzeri TS44, YO5_08343

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri TS44 Contig00034, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGGGCAAGGCGCTGGTGATGAATACGCTGCGTTGGGCCGACGAGGTGCGTGGCGTGGAATATCTGGAACTGAAGGACGAAGCGCTCGATCCCGAGTTGG CCGAGCGCGAACTGGAGATGGCCAAACGGCTGGTCGAGGACATGAGCGAGCAGTGGAAGCCCGAACAGTACAAGGACACCTTCCAGAACCAGATCATGGA TCTGGTGGAGAAGAAGGCCCGCGAAGGCAAGCTCGAAGCCGTCGGCGGGCCGGAGGAGGCCGTGGACCGGCGTGGGGCGGACGTCATCGACCTCACCGAA CTGCTCAAGCGCAGCCTGGCTGCCAAACCGGGCAAGGCACGCGCAGCAGCAGATGACGCCGAGGACGGTGCTGGCGAAGGTGAGAAGTCGTCCGCCAAGG CCAAGCCGTCGAGCAAGGCCAAGCCGAAGAGCACCACCTCCCGCGCGAGCAAATCCGCTGCAAGCGAGCCGCGCAAAACCACACCCCGCAAGAAGGCCGG
DNA Sequence for Gene
>YO5_08343
ATGACGGCCGGCATGCGCGCGCCGCGCAAGAGTACGGGCCGCCCGCAGGTCGGCGGCGTGGGCATCAGCAGTGCGCAGCGGGTCATCGATGCCGCCAGTG GCGTCAGCAAGCGCGAGCTGGCCGAGTATTACCTCGGCGTTGCCGAATGGCTGCTGCCGCAGCTCAGGGGGCGGCCGCTGTCGTTGGTGCGTGCGCCGGA GGGCCTTGCCGGAGAAACCTTCTTCCAGCGCCACTGCGGGCGGCTGAAGATGCCGCATATGCGCCTGCTCGACCGCGCGCTCGATCCTGAGCATGCGCGG CTGATGCAGGCCGACAGCATCACGGCGGTGATCGAAGCGGTGCAGATGGGCAGCATCGAATTCCACACCTGGAACGCCCGCAGCGACCGCATCGAACGAC CCGATCGGGTGATTTTCGATCTCGATCCCGATCCGGCGTTGCCTTGGTCGAGCATGGTCGAAGCAACCGAACTGACGCTGCAGCTGCTCGACACGCTCGG CCTGCGGGCCTTCACCAAGACCAGCGGCGGGCGCGGCATGCACGTGGTGGTGCCGATCGACCGCCGGCATGACTGGGAGCGGGTGCGGCAGTTCGCCCGC GCGGTCAGCGAGCGGCTGGCGCACGAGGCGCCGACGCTGATCGTCGACAAGATGGGACCACAGAACCGCGTCGGCCGAATCTTCGTCGATTACCTGCGTA ACCAGAAGGGCGCCAGCACCGTGGCCGCCTATTCAGCGCGGGCGCGGCCGGGGCTCGCGGTTTCGGTACCGTTGCAGCGCGCCGAGCTGGCGCTTATCGA TGGCGCGAATCAGTGGCACATCCGCAACCTCGGCGAGCGCCTGGCAACACTCGCCGACGATCCCTGGGCGGATTACCGCTCGACCCGCCAGAACCTCGCG GCGGCGCTTGGGCAGTTGCCGGGCACCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGACTGCCGCCAACCACCAAGGCGCGACGGCCCATGAGTCGCGGAACCTAGCTGGGCTGCTGGTCGTCCGGATCGGCGACGGTCTGGCCGCCATAGGGC GAGCCGGGTTTGTTCTCGTCCAGCTCGTCAGGGCAGGGCACCTGCGGCACATCGCCGGGCTTGTCGTGGACCACCGGATCGGGTTGCGGAATATCGGGGC GTGCGTGGGTCATGGGTGTTCTCCTGGCGGACGGCTGCTGAACGAGCATAGCTATAGCGATGGAGGTGGCAGGCACACGGTGGTTCCGGCCGGTCATCGC CATGCGCTGGATGCGCGACGGGCGGGTGCTGCCGTCGGTAGCACAGGGCCGCGCGGCCTGAACTTTTCCGCCCGGCCTCGGCTCGGAAGAAGGGAGTCCG CGTCATGCGGACGGTCCTTTGCGGCCACCCGTCCAGCCGACTGCCTTGTGCCTGTCGGCCGGCGCGTGCCGCAACGCAACGCACAGGAGCCCGCCGATGA
Amino Acid Sequence
>ATP-dependent DNA ligase
MTAGMRAPRKSTGRPQVGGVGISSAQRVIDAASGVSKRELAEYYLGVAEWLLPQLRGRPLSLVRAPEGLAGETFFQRHCGRLKMPHMRLLDRALDPEHAR LMQADSITAVIEAVQMGSIEFHTWNARSDRIERPDRVIFDLDPDPALPWSSMVEATELTLQLLDTLGLRAFTKTSGGRGMHVVVPIDRRHDWERVRQFAR AVSERLAHEAPTLIVDKMGPQNRVGRIFVDYLRNQKGASTVAAYSARARPGLAVSVPLQRAELALIDGANQWHIRNLGERLATLADDPWADYRSTRQNLA AALGQLPGT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site