Pseudomonas stutzeri TS44, YO5_13921

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri TS44 Contig00014, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCTGAAAGATATGTACGCCACCGCCTTCGAAGTGGAAACCAAATGGATCGTCGAGGCCGCCAGCCGCCGCCAGAAGTGGATCGACCAGGCGCAGTCGC TGAACCTCTACATCGCCGGCGCCTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGCGGCCTGAAGACCACCTACTACCTCCGCGCCCT GGCCGCGACCAGCACTGAGAAGTCCACCATCAACACCGGCAAGCTGAACGCCGTGAGTTCAGTGATCGACGAGAGCCTGAGCGCTGAGCCGAAGCCGGCA CCGGTGCCGCAGGCGTGCAGTATCGATAACCCCGACTGCGAAGCCTGCCAGTGAAGCGCAGCGGCAAGCGGCAAGCCGTCCGTGCTGGCCGAAGCTGCAC ATCCATGATCGAAGGGTCGGGATAGCCTCCCGGCCCCTCCACCGAACCACTTGCAGCTTGAAGCTTGCCGCTTGAAGCTGCTCCTGAAAGGAGCCCTAGT
DNA Sequence for Gene
>YO5_13921
ATGCTGAGCTGGGACGAATTCGACGAAGAAGACACCACCACCGCCGCGCCAGCCACCGCTGCCGCGCAGCCTGCGAGCCAGACCGCCACCAAGCTGGACA ACGACGCCGCCGGCTCCGTGGAGGAAGCCCGCGCCGTTTCCGCTGACGACTCCGACGCCATCGCCCGCGCCAAGCGCGCGCTGGACGAACTGGACGTCCG CGAAGGCCTCAACGAACTGGAAGGCGAAGCCGCCCGCGTGCGCGTCGACGAGAAGCGCATGATCAACGCCCGCGCCGACCTCAATCAGCTCGTACCCTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCCCAGGAAGTGAACATGAACGCCGACATTGCCCTGTGGAAGAGCA AGGACGGCCTCAGCGAAGACGAGCGCCGCATCGTCAAGCGCAACCTCGGCTTCTTCTCCACCGCCGACAGCCTGGTCGCCAACAACCTCGTGCTGGCCAC CTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGAGCGTCGCGAAAAAGGCCAGCTGGGGCCTCAAGTACACCCGTTCCATCTCCG ACCCGACCTTCCAGACCGGCACCCCGGAGACCGACAAGCAATTCCTGCGCAACCTCATCGCCTACTACTGCGTGCTCGAAGGCATCTTCTTCTACTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTGCGTGACGAGTCCATGCACCTGAACTTC GGCATCGACATGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGACGCCGAAATGAAGGACGAAGCGACCCAGATGATCCTCCAGGGCACCCAGC TGGAGATCGAGTACGCCCGCGACACCATGCCCCGTGGCGTACTCGGCATGAACGCCGCAATGATGGAGGACTACCTCAAATTCATCGCTAACCGTCGCCT GACGCAGATTGGCCTGAAGGAAGAGTATCCCGGTACTACCAACCCGTTCCCGTGGATGAGCGAGATCATGGATCTCAAGAAGGAGAAGAACTTCTTCGAA ACGAGGGTGATTGAGTATCAGACAGGGGGAGCGTTGAGCTGGGATTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGCAATAGAGCCAACCTCACTATCGATAATTTACATCGAAAGTGTTACCTGATAGAGATATTGGGATAGCAAGTAAAACTTGAGCCCCGCCTTATGCGGG GCTTTTATTTGGCTATGTCTGCATGAACTGTTGAGCAGGGCGTCAGACGCCGCATATACCTAGAAAGGCAACGCATAAGTCCATGTTTTGTACGAAAAAC ACAATCGTCCCAGCTTTCAACACGCGCTGAATTTTTCAGCGAATGTTGAAATAGTGCATCTAGGCCATGAGTAGCCGCTGTTCTGCGGAGGGCAGCGTCG CCGGCCAACCGAGGCTGGTGTAGTCATAGCCGACGACTACACCGGCTACACAATGCCGTCACCGCACAAGATGGCATCGAATGCCTGAGTCACTAAAGTG CAAGTTTGCCGGGGTGCAGCAAGTGCAACCTAAAGATAAGACCGGCCGCGCCGGTCAAACTCTACGGCATCGTAGCGTGACTGCAAGGACGTCAGAGACG
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDEEDTTTAAPATAAAQPASQTATKLDNDAAGSVEEARAVSADDSDAIARAKRALDELDVREGLNELEGEAARVRVDEKRMINARADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTPETDKQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNF GIDMINQIKIENPHLWDAEMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site