Pseudomonas stutzeri TS44, YO5_13233

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri TS44 Contig00009, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGCATTATCCCTATGCATCCTGCTCCAGCAACCACAGACCGCCGAATGGGAATCGGGTTCATTTCCAGCGCCCCGGCGTGCCATCCGAGGAAACGTC ACATGCACGAGCCTACGCCCCTGCTACCGCCCGGCGCCGATGCCGAGGCGCGCCGCGCCGCCGTCTATCTGGTGATGGCGCAGATCCCGCCGGGCAAGGT GATCAGCTACGGCGAACTGGCCGCCATCGCCGGCCTCGGCCGTGCCGCGCGCTGGGTCGGCCGGCTGATGGCGCAGCTGCCGGATGACACGCGCCTACCC TGGCACCGGGTCATCGCCGCCGGTGGCCGCCTGAGCCTGCCGGCCGGCAGCCCCGCCGGGCACGAGCAGCGCATGCGCCTGCGTGCCGAGGGCCTGACCA TCCGCAACGACCGCGTGGACATGCGTCGCCACGGCTGGCATTCAACGGAGCACAGCGGTTAGAGTTCGCGCTCCGTCCTGCCGCCACAGATTGTCGATGT
DNA Sequence for Gene
>YO5_13233
ATGTCCCGTGAAACCTGGCGCGATGCCCTCGCCGCCTATGCCAGCCCCGCCAGCCTGGCCCTGCTGCTGCTGGGGTTCGCCGCGGGACTGCCCGCCGTGC TGGTGTTCTCCACGCTCTCGGTGTGGTTGCGCGAAGCCGGGGTGTCACGGGAAACCATCGGTTTCGCCAGCTGGATCAGCCTGGCCTATGCCTTCAAGTG GGTCTGGTCGCCGATGCTCGACCAGTGGCGCCTGCCGTGGATCGGCGCGCTCGGGCGGCGGCGCTCGTGGCTGGTGCTCTCGCAGGCGCTGATCGCCTTC GGCCTGGTGGGCATGGCGCTGTGCAATCCGCAGCACAACCTGACCCTGCTGATCGCCCTGGCGGTGCTGGTGGCGTTTTCTTCCGCGACCCAGGACATCG CCATCGACGCCTACCGCCTGGAAATCGCCGAGGACAAGCTGCAGGCGACCCTGGCGGCCAGCTACATGACCGGTTACCGCGTCGCCATGCTGCTGGCCAG CGCCGGTGCCCTGTTCCTCGCCGAGTGGCTGGGCTCGAGCAACCTCAACTACAGCCAGGCGGCCTGGAGCTTCACCTATCTCGCCTTCGCGCTGCTGATC CTGCCCGGCCTGGTCACCAGCCTGGTGATCCGCGAGCCGGATGCCGGCACACCGCTGCCCAACGAACCGGCGCGCTACACCTTCAACCATCAGCTCGCCG CCGTCGGCCTGCTGCTGGTGCTGCTGATTTCCGTACCCGCCATGATCAACGCACTGATCGCCCAGGCCTGGCCACGGGCGACGCTGTATGCGCTGTTCAT CCTCGGTTCGATCTCGCCGATGGGCCGCTCGCTGCTGATCCCGGTGCGCCACATCCTCCATCAGGCCGGGCAGAAGCAGCGCCCGCCGCGCTTCGACTTC ACCCACCAGGCGGTTTCGGTGATCGTACTGATCATCCTGATGGTCTCGACCACCGGCATGTTCCAGTCGTACTGGGGCGGCTACTGGCCACGCGGCACCA TGTATCTGCTGATCTGCTGGGGCTGTCTGTCGGCGCGTGGTCGCATCCTGATGGGCCCGGTGCTGACACCGATCACCGACTTCATCCTGCGCTATCGCTG GCAGGCGCTGCTGCTGCTCGGGCTGATCGCCACCTACCGGATGTCGGACACGGTGATGGGCGTGATGGCCAACGTGTTCTACATCGACCAGGGCTTCTCC AAGGACCAGATCGCCAGCGTCAGCAAGCTGTTCGGGCTGGTCATGACGCTGCTCGGCGCGGCATTCGGCGGCCTGCTGATCGTGCGTTTCAGCATCCTGC CGATCCTGTTCATCGGCGGCGTCGCCTCGGCGGCGACCAACCTGCTGTTCATGGCGCTGGTGCAGATGGGCGCCAACCTGAACATGCTGATCGTCACCAT TTCCTGCGACAACTTCAGCGGCGGGCTGGCCTCCACGGCGTTCGTCGCCTACCTGTCGAGCCTGACCAACCTGAAGTTCTCCGCCACCCAGTACGCCCTG CTCAGCTCGCTGATGCTGCTGCTGCCGCGCCTGCTCGGCGGTTATTCGGGAGTGATGGTCGAGCAGCTGGGCTACAGCGACTTCTTCCTGGTCACCGCCC TGCTCGGCGTGCCGACGCTGGTGCTGATCGTCTGGCAGTGGCGCCGGGGGCTGCGGCAACCCAAAGACCCCGGCCAAGAGGCCACTTCCCGGCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTCCGTCAGCCCTGCACCAGATGCACCACCCGCTGCGGGAATGGAATGCCGACACCCGCAGCCATCAGCCGCTCCTTGGCCAGCTCCATGAAGTCGGC GGTCACCGCACCGACATCGGCGGTCGCCGCCCACACACGCAGCACCAGCGTCACAGCGTTGTCGCCCAGCGCAGTGACCACCACCACCGGCTCGGGATCG CGCAGCACGCGCGAGTCCTCGGCGATCTCCAGCAGGATGCGACGCGCCAGCTTGATGTCGCTGCCGTAGTCGATGCCGATGTTGATGTCCGCCCGCCGCT GCGGCTCGCGCGAGTAGTTGGTGATATGGCCGTTGGACAGGCTGCCGTTGGGCACCACCACGGTCTTGTTGTCGCCGGTCTTGAGCACGGTGTGGAATAT CTGGATGGAATGGACGGTGCCGCTCACCCCCTGCGCCTCGATCCACTCGCCGACGCGGAACGGCCGGAACAGCAGGATCAGCACGCCGCCGGCGAAGTTC
Amino Acid Sequence
>permease
MSRETWRDALAAYASPASLALLLLGFAAGLPAVLVFSTLSVWLREAGVSRETIGFASWISLAYAFKWVWSPMLDQWRLPWIGALGRRRSWLVLSQALIAF GLVGMALCNPQHNLTLLIALAVLVAFSSATQDIAIDAYRLEIAEDKLQATLAASYMTGYRVAMLLASAGALFLAEWLGSSNLNYSQAAWSFTYLAFALLI LPGLVTSLVIREPDAGTPLPNEPARYTFNHQLAAVGLLLVLLISVPAMINALIAQAWPRATLYALFILGSISPMGRSLLIPVRHILHQAGQKQRPPRFDF THQAVSVIVLIILMVSTTGMFQSYWGGYWPRGTMYLLICWGCLSARGRILMGPVLTPITDFILRYRWQALLLLGLIATYRMSDTVMGVMANVFYIDQGFS KDQIASVSKLFGLVMTLLGAAFGGLLIVRFSILPILFIGGVASAATNLLFMALVQMGANLNMLIVTISCDNFSGGLASTAFVAYLSSLTNLKFSATQYAL LSSLMLLLPRLLGGYSGVMVEQLGYSDFFLVTALLGVPTLVLIVWQWRRGLRQPKDPGQEATSRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site