Pseudomonas stutzeri TS44, YO5_11500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri TS44 Contig00007, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCACCGAGGCCCTTCAGTACGCCGGCTGCGGCGCCGAGCGCCTTGCGCCACTGGCGGGTGTCGAGCTCCTCGCCCTTGCCGACGCCAAGCAGCAGCAC GCGCTCGGCCTTCAGGTTCGGCAGGCTGTGCAGCAGCAGGGTCTGCCCGACCTTGCCGTCGAGATCGCCGCGCTTGAGGATCGAGCCGATGACACCGCCG CTGGCGATATCGACGGCCTGCGCCGTTTCGCCGAGGGTGCGTCCCTCACCGACGGGCAGAACCAGCGTGGCGGTTTTCAGCGCGGATGCTTTCGCGGTCT TTACTACGAATTCCATGACGGGAGTCCCCAAGACAAAGAGTTGGGTTTGCAGGATAATGCCAGGCCAATTTTCCGGTGGTTCGCCTGCCGGCCGTTGACG GCGGATGTGCTGCCATTTCAATGGCCTATCTCGGCGAACCGGCAACTGGCGGCTAGTTTGAGCGTAGCCGCCGGAGCCTGACAACCCTGGAGTGTCCGGT
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| DNA Sequence for Gene |
>YO5_11500
TTGATCGTCTTTCGTTATCTGTCCCGTGAGCTGTTGGTCACCGTGAGCGCGGTCAGCGCCGTGCTGCTGGTGATCATCATGAGCGGACGCTTCATCAAGT ACCTGGCCCAGGCTGCACAGGGGTTGCTCGATCCGGGTGTGCTGTTGCTGATCATGGGATTCCGCCTGCCGGGCTTCCTGCAATTGATCCTGCCGCTGGG GCTGTTCCTCGGCATCTTGCTGGCCTATGGACGACTCTATCTCGACAGCGAGATGACGGTGCTGTCGGCCACCGGAATGAGCCAGCGCCGCCTGCTGTGC TACAGCCTGGCGCCGGCGGCGCTGGTGGCGGCGCTGGTCGGCTGGCTGAGCCTCGGGCTTGCGCCGCAGGGTATTGCCGAAGTGGATCGCATCCTCAATC AGCAGGATTCGCTGACCGAGTTCGACACCCTGGTACCCGGGCGTTTCCAGACCCTGCGCGATGGTTCGCGGGTGACCTATACGCGCGAGCTTTCGGCCGA TCGCAGCGAGCTGGCCGGGGTGTTCATTTCCGAGACCAACACATCGGCTCGTTCCGGCAAGACGCGTGGTCTTTCCGTGCTGGTGGCCGAGAGTGGACGG CAGGAGATCCAGCCTGACGGCAGTCGCTACCTGATTCTGGAGAATGGCTTTCGCTACGACGGCAATCCCGGGCAGGCCGACTATCGCGCCATCCAGTACG ACACCTACGGTGTGTTGCTGCCCAAGCCGGAAGTGGCGGTCGAGCTGAGCGAACGCGAGGCGCTGCCGACGCGGGACCTGCTCGGCAGCGACAGCCTGCG CCATCGTTCCGAGCTGCAGTGGCGTCTGTCCATGCCGGTGCTGGTGTTCGTCGTGACGTTGCTCGCCGTGCCGCTGGCGCGCGTCAACCCGCGTCAGGGG CGCTTCCTCAAGTTGCTGCCGGCGATCCTGCTTTATATGACGTACCTGGCGCTGCTCATTGCCGTGCGCGGCGCGCTCGACAAGGGGCGAATCCCGATGG CGCTGGGATTGTGGTGGGTACATGGGCTGTTCTTCGCGATAGGTCTGCTGATGCTGTACTGGGAGGCGTTGATGCTGTGGTTGAAGAAGCGTCGCGCGGG GGTGGTGCATGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCTCGATCGCTACATCGCGATCCATGTCTTTCTGGCGATCCTGGCGGTGCTGGGAGTCATCGTCGGGCTGGCCCTGTTGTTCGCCTTCATCGACGAGTTG GGCGACGTCGAGGGCGGGTACGGCCTGGTGGATGCGCTGCAGTACGTGCTGCTGACGTCGCCGCGCCGACTCTACGAGATGCTGCCGATGGCGGCGCTGA TCGGTTGTCTGATCGGGCTGGGCATGCTTGCCAGCAGCAGCGAGCTGACCATCATGCGCGCCGCCGGCATTTCGCTCGGGCGTATCGTCGTGGCGGTGAT GAAGCCGACGCTTGTCCTGCTGCTGGTCGGCGTGCTGATTGGCGAGTACGTGGCGCCCTGGACCGAGGATATCGCCCAGGCCCGTCGTTCGCTGGCGCAG GGGGAGGGCGAGGCGCAGAGCAGCAAGCATGGCCTCTGGCATCGGCAGGATAACGAGTTCGTGCACGTCAATGCCGTGCAGCCGGGTGGGGTGCTGATCG
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| Amino Acid Sequence |
>permease
MIVFRYLSRELLVTVSAVSAVLLVIIMSGRFIKYLAQAAQGLLDPGVLLLIMGFRLPGFLQLILPLGLFLGILLAYGRLYLDSEMTVLSATGMSQRRLLC YSLAPAALVAALVGWLSLGLAPQGIAEVDRILNQQDSLTEFDTLVPGRFQTLRDGSRVTYTRELSADRSELAGVFISETNTSARSGKTRGLSVLVAESGR QEIQPDGSRYLILENGFRYDGNPGQADYRAIQYDTYGVLLPKPEVAVELSEREALPTRDLLGSDSLRHRSELQWRLSMPVLVFVVTLLAVPLARVNPRQG RFLKLLPAILLYMTYLALLIAVRGALDKGRIPMALGLWWVHGLFFAIGLLMLYWEALMLWLKKRRAGVVHG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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