Strain | Pseudomonas stutzeri TS44 Contig00007, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCGGCCACGGCATGCAGGTCGGCATCGTGCAGTTCATCAAGGGCGCGGCCAGCACCGGCGAGGAGGCGTTCTTCCGCCGCTTTCCGGAGGAGGTGCGCTA CCACGTGATGGGCGAGGGCTTCACCTGGGAAACCCAGGACCGCCAGCGCGACATCACCAAGGCGCAGCAGGCCTGGGCCGTGGCCCGCGAGCTGCTGGAC GACGAACGCATCGGCCTGGTGGTGCTCGATGAGCTGAACATCGCGCTGAAGTACGGCTACCTGGAGCTGGACCGCGTGCTCGCCGACATCGCCGCGCGGC CGCTGCTGCAGCACGTCGTGGTCACCGGTCGCGGGGCGCTGCCGGGGATGATCGAGGCCGCCGACACGGTGACCGAGATGAACCTGGTCAAGCACGCGTT CAAGGCCGGGGTGAAGGCGCAGAAGGGGATCGAGTTTTGATGCGTTCGTCCACCAATGCGCCGGGCGTTGTGTCAGCGCCTTGGCTGACGGGGGGCCGCG
|
|
DNA Sequence for Gene |
>YO5_11100
ATGAATAGCAGAAATTGTCCGGCGCTGCTGATCGCCGCGCCGGCCTCCGGTCAGGGCAAGACCACCGTCACCGCCGCCCTGGCGCGCCTGCACACGCAGG CCGGGCGGCGCGTGCGGGTGTTCAAGTGCGGGCCGGATTTTCTCGACCCGATGATCCTCGCGCGCGCCAGCGGCCAGCCGGTGTACCAGCTCGACCTGTG GATGGTCGGCGAGGAGCAGTCGCGGCGCCTGCTGTGGGAGGCGGCGGGCGAGGCCGACCTGATCCTCATCGAAGGGGTGATGGGGCTGTTCGACGGCGCA CCTTCGGCCGCCGACCTGGCACGGCGCTTCGGCGTGCCGGTGCTGGCGGTGATCGATGGCTCGGCGATGGCGCAGACCTTCGGCGCGCTGGCGCACGGGC TGGCGAGCTTCCAGGCGGACCTGCCGTTCGCCGGCGTGCTGGCCAACCGTGTCGGCAGTGCGCGGCACGGCGAAATCCTGCGCGACAGCCTGCCGGCGCC GCTGCGCTGGTACGGCGCGCTGCCGCGCAGCGCCGAGGTGGAGCTGCCGAGCCGACATCTGGGGCTGGTCCAGGCCGAGGAACTGGCCGATCTGGATGCG CGCCTGGACGCCGCCGCCGAGGCGCTGGCGCAGAGCGCGGATACCGAACTGCCGCCAGCGGTGACGTTCGCCGCGCCGCAGGCGGCGCCCGTCGAGCCGC TGCTGGCCGGTGTGCGCATCGGCGTGGCGCGCGACGCCGCCTTCGCCTTTCTCTACCAGGCCAACCTCGACCTGTTGCGCGCGCTGGGCGCCGAGCTGCT GTTCTTCTCGCCGCTGCGCTTCACCCGCTTGCCGGCCGTCGACAGCCTCTATCTGCCGGGCGGCTATCCGGAACTGCACCTGCGCAGCCTCGCGCGCAAC CGGCCGATGGCCGAGGCGATCCGCGCGCACCACGCCGCCGGCAAGCCGATCCTCGCCGAGTGCGGCGGCATGCTCTACCTGCTCGACGGACTGACCGACA CCGCCGGCGTGCGTGAGCCGATGCTCGGCCTGCTGCCGGGCGAGGCACGGATGCGCCCGCGCCTGACCGCCCTGGCGCTGCAGGAAGTGGCCCTGCCGGA AGGCCGTTTGCGCGGCCATACCTTCCATCATTCGGAGCTGGAGTCGCCGCTCGCACCGCTGGCCCGCGGCGAGTGCCCGAACTACCGGCGCACCGCCGAA GCCGTCTACCGGCAGGGGCGGCTGACGGCCTCCTACATCCACTTCCACATGCCGTCCGATCCCGTGGCGGCCGCGGCCCTGTTGCGACCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
ACGAACACGCCTTCACCGACGAACAACGCGCCGGCGTCTACCGCGCCATCGCCGAGCGCCGCGACATGCGCCATTTCAGCGGCGGCGAGGTGGCGCCCGA ATTGCTGGCCAGGCTGCTGCAGGCCGCGCATCGGGCGCCCAGCGTCGGGCTGATGCAGCCCTGGCGCTTCGTGCGCATCACCTCGACCGAGCTGCGCGCA CGCATCGCGGCGCTGGTCGAGGCCGAGCGCCAGTGCACCGCCGAGGCGCTGGGCGAGCGTTCTGCCGAGTTCCTGCGGCTCAAGGTCGAGGGCATCCATG ACTGCGCCGAGCTGCTGGTCGCGGCGCTGATGGACGGGCGCGAGGCGCACGTGTTCGGTCGGCGCACCCTGCCGGAGATGGACCTCGCCTCGCTGGCCTG CGCGATCCAGAACCTCTGGCTTGCCGCGCGCGCCGAGGGGCTGGGTCTGGGCTGGGTCTCGCTGTTCGATCCGCAGGCGCTGGCCGAGCTGCTCGGCATG
|
|
Amino Acid Sequence |
>cobyrinic acid a,c-diamide synthase
MNSRNCPALLIAAPASGQGKTTVTAALARLHTQAGRRVRVFKCGPDFLDPMILARASGQPVYQLDLWMVGEEQSRRLLWEAAGEADLILIEGVMGLFDGA PSAADLARRFGVPVLAVIDGSAMAQTFGALAHGLASFQADLPFAGVLANRVGSARHGEILRDSLPAPLRWYGALPRSAEVELPSRHLGLVQAEELADLDA RLDAAAEALAQSADTELPPAVTFAAPQAAPVEPLLAGVRIGVARDAAFAFLYQANLDLLRALGAELLFFSPLRFTRLPAVDSLYLPGGYPELHLRSLARN RPMAEAIRAHHAAGKPILAECGGMLYLLDGLTDTAGVREPMLGLLPGEARMRPRLTALALQEVALPEGRLRGHTFHHSELESPLAPLARGECPNYRRTAE AVYRQGRLTASYIHFHMPSDPVAAAALLRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|