Pseudomonas stutzeri TS44, YO5_12597 (fliG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri TS44 Contig00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTCACCCGTACGCCGTGGACCGCCGACGACCTGGCGCGCTTCACCCGCCTGGTGCAGGACGCCGTCGGCTTCGACGCCAGCCGCGGCGACAGTGTCAGC GTGATCAATACCGCCTTCGTCGCGGACTCCTTCGACGATGCGGTGGTCGACATTCCGTTCTACTCGCAGCCGTGGTTCTGGGATGTGGTCAAGCAGGTGC TGGGCGTGCTGTTCATCCTGGTGCTGGTGTTCGGCGTGCTGCGGCCGGTGCTGAACAACCTGACCCATGCCGGCAAGGGCAAGGAATTGCAGAACATTGG CGACGGCGATGTCGAACTGGGAGACATGGACGGCGTCGATGGCGCGCTGGCCAACGACCGCGTCAGCCTGAGCGGCCCGCAGAACATCCTGTTGCCGAGT CCGAGCGAGGGATACGAAGCCCAGCTCAACGCGATCAAGAACCTGGTGGCCGAAGATCCGGGACGGGTCGCCCAGGTGGTGAAAGAGTGGATCAACGCCG
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| DNA Sequence for Gene |
>YO5_12597
|fliG
ATGAGTGAGAACCGGGTTCAAACCAAGCTCAACAAGGTCGACAAGGCCGCAATCCTGCTGCTGTCGCTGGGCGAAACCGATGCCGCGCAGGTGCTGCGTC ACCTCGGTCCGAAAGAGGTGCAGCGGGTCGGCACGGCGATGGCGCAGATGCGCAACATCCACCGCGAGCAGGTCGAGCGGGTGATGAGCGAATTCGTCGA GATCGTCGGCGACCAGACCAGCCTCGGCGTCGGCTCCGACGGCTACATCCGCAAGATGCTCACCCAGGCGCTGGGCGAGGACAAGGCCGGCGGCCTGATC GACCGCATCCTGCTGGGCGGCAACACCAGCGGCCTGGACAGCCTGAAATGGATGGAGCCGCGCGCCGTGGCGGACGTGATCCGCTACGAGCACCCGCAGA TTCAGGCCATCGTGGTGGCCTATCTGGACCCCGATCAGGCCGGCGAGGTGCTGTCGCACTTCGACCACAAGGTGCGTCTGGACATCGTGCTGCGCGTATC GTCGCTCAACACCGTGCAGCCGGCGGCGCTGAAGGAACTCAACCTGATCCTCGAGAAGCAGTTCTCCGGCAACACCAACACCAGCCGCGCCAGCCTCGGC GGTGTGAAGCGTGCCGCCGACATCATGAACTACCTCGACAGCTCCATCGAAGGCCAGCTGATGGACGCCATCCGCGATGTCGACGAAGACCTGTCGACGC AGATCGAGGACCTGATGTTCGTCTTCGACAACCTGGCCGATGTCGACGACCGCGGCATCCAGATCCTGCTGCGCGAGGTTTCCTCCGACGTGCTGGTGCT GGCGCTCAAGGGCGCCGACGAAGCGATCAAGGAGAAGGTCTTCAAGAACATGTCCAAGCGCGCCGGCGAACTGCTGCGCGACGACCTGGAAGCCAAGGGC CCGGTGCGCGTCAGCGAAGTCGAGAACGCGCAGAAGGAAATCCTCACCATCGCCCGCCGCATGGCCGAAGCCGGGGAGATCGTCCTGGGCGCCAAGGGCG GCGAGGAAATGGTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGTGGCCAAGGACAATCCCAGCGATGTGATCCGTGCCCAGGACGTGCGGCTGTTCGACCGCTGGGCGCTGCCCAGCTTCGACGCCGAGGGCGCGGCAG CCGATGAGCCCGTCGAAACGGAGCCGGTCGCAGCCGAAGAACTGGCGCATAGCGAAGAGGTGCCGGTCGAGGAAGTCAAACCCTTGACGCTCGACGAGCT GGAGGCGATTCGCCAGGAGGCCTACAACGAAGGCTTCGCCACCGGCGAGAAGGACGGCTTCCACGCCGGCCAGCTGAAGGCGCGCCAGGAGGCCGAAACG GCGCTGGCCGCACGCCTGCAGAGCCTGGAACAGCTGATGACGCAGCTGCTCGAGCCGATCGCCGAGCAGGATCGCAACCTCGAACACGCGCTGGTCACGC TGGTCAGCCACCTGTCGCGCGAGGTGATCCAGCGTGATCTGCTGATCGATTCCAGCCAGATCCGCCAGGTGCTGCGCGAAGCGCTCAAGCTGCTGCCGAT
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| Amino Acid Sequence |
>flagellar motor switch protein FliG
MSENRVQTKLNKVDKAAILLLSLGETDAAQVLRHLGPKEVQRVGTAMAQMRNIHREQVERVMSEFVEIVGDQTSLGVGSDGYIRKMLTQALGEDKAGGLI DRILLGGNTSGLDSLKWMEPRAVADVIRYEHPQIQAIVVAYLDPDQAGEVLSHFDHKVRLDIVLRVSSLNTVQPAALKELNLILEKQFSGNTNTSRASLG GVKRAADIMNYLDSSIEGQLMDAIRDVDEDLSTQIEDLMFVFDNLADVDDRGIQILLREVSSDVLVLALKGADEAIKEKVFKNMSKRAGELLRDDLEAKG PVRVSEVENAQKEILTIARRMAEAGEIVLGAKGGEEMV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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