Pseudomonas stutzeri TS44, YO5_04317

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri TS44 Contig00003, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAAGCGGGTCTTGCCGCAACCGGTCGGTCCCTTGATCAGCACGGGCATGCCGTGTTGCCAGGCCTGCTCGAACAACGCCTGTTCGTTGCCCAGGGGCTG ATAGAACGGCGCGTCGGGAGTGTCGGCAACTACGGTCAGTCTTTCGGGCGCATTCACGGGCAATACCTCACTGCGGTAGTCGGTTAATCACGAACGACAA ACTACCGCCCGCATCGCTGCCCCTCAAGGCATCCGCCGGCAAAGCTTGATCGCGGTCAAGCCCCGCTCGAATTGGTCGCCGCCGGTCAGGCATTCGCTAC TCGCAGCGCCAAATGCCGGGCTATCGTCGCCCCCGCGACAAGGCGTCACGCCTGGGGGGTGTCGGGGGGGCTCTTGATTGCCGTCAAGCGCTCGGCGATT TGCGCTCTCCTAGGATGCAACCGCACCAATTAATCACTGGAATTGCCGCACCGCCGTCACTTAGCAGGAATCGCATGAGGCGATTCAGAGGAGAAAACGT
DNA Sequence for Gene
>YO5_04317
ATGCGCAAACCACTACTGGCCGGACTTGTCGCCGGCTTTTCGCTGCTTGCTCTGGGCGTGGCCCAGGCGCAGGACACAGCAGAAGACAAAGCCCAGGCCG CTTATAAGGGCCAAGCGTCGACCGTCGACCCAGCCAGTGCGCAGGTCGTGCGTTCTCCGGGCGCGCCGGATCTGAGCGCCGGTGAGTTCGAGCAGGCCAA GGAAATCTACTTCCAGCGCTGCGCCGGCTGCCACGGCGTGCTGCGTAAAGGCGCCACCGGCAAGCCGCTGACCCCGGACATCACCCAGGAGCGCGGCCAG GCCTATCTGGAAGCGCTGATCACCTACGGTTCGCCGGCGGGTATGCCCAACTGGGGCACCTCGAACGCGCTGACCAAGGACCAGATCACCTTGATGGCCA AGTACATCCAGCACACCCCGCCGACTCCGCCGGAGTGGGGCATGGCCGAGATGAAGAATTCCTGGAAGGTCCTGGTCAAGCCGGAAGATCGTCCGAAGAA GCAGATGAACGATCTCGACCTGCCGAACCTGTTCTCCGTCACCCTGCGTGACGACGGCAAGATCGCGCTGATCGACGGCGAAACCAAGAAGATCGTCAAG ACCATCGACACCGGCTACGCCGTGCACATTTCGCGCATGTCGGCCTCCGGCCGCTACCTGCTGGTGATCGGTCGTGACGCCAAGATCGACATGATCGACC TGTGGGCCAAGGAGCCGACCAAGGTCGCCGAGATCAAAGTGGGTATCGAGGCTCGTTCGGTCGAGACGTCCAAGTACAAGGGCTACGAGGACAAGTACGT CATCGCCGGCGACTACTGGCCGCCGCAGTTCACCATCATGGACGGCGAGACCCTGCAGCCGCTGCAGATCGTCTCCACCCGTGGCATGACTGTGGACAAG CAGGAATACCACCCGGAACCGCGCGTCGCGGCGATCATCGCCTCGCACGAGCATCCGGAGTTCATCGTCAACGTCAAGGAAACCGGCAAGATTCTGCTGG TCAACTACAAGGACATCGACAACCTCACCACCACCAGCATCAACGCCGCGCCGTTCCTGCATGACGGTGGCTGGGACAGCACGCACCGCTACTTCATGAC GGCCGCCAACAACTCCAACAAGGTTGCGGTGGTCGACTCCAAGGAGCGCAAGCTGAGCGCGCTGGTCGAAGTCGGCAAGATCCCGCACCCGGGTCGTGGC GCCAACTTCAATCACCCGAAATACGGTCCGGTCTGGGCCACCAGCCACCTGGGCGACGAGAGCATCTCGTTGATCGGTACCGATCCAAAAAACCACCCGC AGTACGCGTGGAAGCACGTCGACACCCTGAAGGGCCAGGGCGGTGGTTCGCTGTTCATCAAGACCCATCCGAAGTCCAAGCACCTGTACCTGGATACCAC CTTCCACCCGGATGCCAAGGTCAGTCAGTCGGCCGCGGTGTTCGACATCAGCAACCTGGAAGCGGGCTTCAAGGTTCTGCCGATCGGCGAGTGGGCCGGT CTGAAGGACGGTGCCAAGCGCGTCGTGCAGCCTGAGTACAACGAGGCCGGCGACGAGGTGTGGTTCTCGGTGTGGAGTGGTCAGGAAGAGGAGTCGGCCA TCGTGGTGGTTGACGACAAGACTCTGAAACTCAAAACAGTGATCAAGGACAAAAGGTTGATTACCCCAACCGGTAAATTTAACGTCCACAACACTCAGTA CGACGTTTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTTTAGCCCCGGGGGCGGGCCTCAAGATCCGCCCTCTTCTTTAGCCTTGAGGAAGTACTCATGAAGAAAGTTCTGCTCCCGCTGCTCGCCCTTGGCGGCG CTCTGGCCCTGCAGCCAGCGCTGGCCCAGGACGGCGAAGCGCTGTTCAAGAGCAAGCCCTGCGCGGCCTGCCACAGCGTCGACGCCAAACTGGTCGGCCC GGCTCTGAAGGAAGTGGCAGCGAAGAATGCCGGCGTTGATGGCGCCGTCGATACGCTGGCCGCCAGCATCAAGAACGGCAGCCAAGGCAAGTGGGGCCCG ATCCCGATGCCGCCAAATGCCGTGACCGAAGAAGAAGCCAAGGCCCTGGCTACCTGGGTCCTGAGCCTCAAGTAACACCCCTGGAGGACGCCATGACCCG CTCCCGACACGCAGTATCACGTTTGGGGCTGACCCTGGCGTCCCTCCTCTTGATTCCTGCGGCCCTGGCCGCGGCGCCCGACGCCGAACGCCAGGCGCAA
Amino Acid Sequence
>nitrite reductase
MRKPLLAGLVAGFSLLALGVAQAQDTAEDKAQAAYKGQASTVDPASAQVVRSPGAPDLSAGEFEQAKEIYFQRCAGCHGVLRKGATGKPLTPDITQERGQ AYLEALITYGSPAGMPNWGTSNALTKDQITLMAKYIQHTPPTPPEWGMAEMKNSWKVLVKPEDRPKKQMNDLDLPNLFSVTLRDDGKIALIDGETKKIVK TIDTGYAVHISRMSASGRYLLVIGRDAKIDMIDLWAKEPTKVAEIKVGIEARSVETSKYKGYEDKYVIAGDYWPPQFTIMDGETLQPLQIVSTRGMTVDK QEYHPEPRVAAIIASHEHPEFIVNVKETGKILLVNYKDIDNLTTTSINAAPFLHDGGWDSTHRYFMTAANNSNKVAVVDSKERKLSALVEVGKIPHPGRG ANFNHPKYGPVWATSHLGDESISLIGTDPKNHPQYAWKHVDTLKGQGGGSLFIKTHPKSKHLYLDTTFHPDAKVSQSAAVFDISNLEAGFKVLPIGEWAG LKDGAKRVVQPEYNEAGDEVWFSVWSGQEEESAIVVVDDKTLKLKTVIKDKRLITPTGKFNVHNTQYDVY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site