Pseudomonas stutzeri TS44, YO5_03447
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri TS44 Contig00003, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGCTGCTGTGGGGCGCGCCGTTCGACTGGGAGGTGCCGCAGTTGCAGCGCTTCAACATCCGCGGCGGCTGGATCGTGATTCCCGAACTGGTGTCGATC GTGCTGGCGCTGGCGGTCTACACGGCGGCGTTCATCGGTGAAACGGTACGTGCCGGCATCCAGGCGGTCAGCCACGGACAGAGCGAGGCGGCCGAGTCGC TGGGGTTGCGCGCCGGACAGACGCTGCGGCTGGTGATCATCCCGCAGGCGCTACGGGTGATCGTCCCGCCACTGACCAGCCAGTACCTCAACCTGACGAA AAACTCCTCGCTGGCGGCCGCCATCGGCTACCCGGACATGGTGTCGCTGTTCGCCGGTACGGTGCTCAACCAGACCGGCCAGGCGATCGAGACGATGGCG ATCACCATGAGCGTGTACCTGGCCATCAGCATCAGCATTTCGCTGCTGATGAACGGGTACAACCGGCGCATCGCGCTGATCGAACGGTGAGGAGCAAGCC
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| DNA Sequence for Gene |
>YO5_03447
ATGACGACTCACCATTTCAAGCCTGACCTGCCGCCGCCGTCGAGCAACCTGGGCGCCATCGGCTGGCTGCGGGCGAACCTGTTCTCCGGCGTCGGCAACA CGCTGCTGACGCTGCTGGGGCTGTATGCGATCTGGCTGGTGATTCCGCCGCTGCTGGACTGGGCGATCTTCAGCGCCGACTGGAGCGGCGAAACCCGCGC CGACTGCACGCGCGAAGGCGCGTGCTGGGTCTTCGTGCGGGCGCGCTTCAGCCAGTTCATGTACGGCTTCTACCCGGCCGAACTGCGCTGGCGGGTCGAC TTCAGCGTGTGGCTGGCGATCATCGGGGCGACGCCGTTCTTCCTGCGCCAGATGCCGCACAAGGTGCGCTACGGGTTTGCCTATCTGCTGAGCTACCCGC TGCTGGCGTACTGGCTGCTGCATGGCGGCTTCCTCGGCCTGCAGACGGTGTCGACCAGCCAGTGGGGCGGCCTGATGCTGACCATCGTCATCGCCGCCGT GGGCATCGCCGGTGCGCTGCCGATGGGCATTCTGCTGGCGCTGGGGCGGCGCTCGGACATGCCGGCGATCCGCGTGCTGTGCGTGACGTTCATCGAGTTC TGGCGCGGCGTGCCGCTGATCACCGTGCTGTTCATGTCTTCGGTGATGCTGCCGCTGTTCCTGCCCGAAGGCATGAACCTGGACAAGCTGATGCGCGCCA TGCTGATGGTGATCTTCTTCGAGGCGGCCTATATCGCCGAGGTGGTGCGCGGCGGCCTGCAGGCGATCCCCAAGGGCCAGTACGAGGCCGCCGCGGCGCT GGGCCTGGGCTACTGGCGCAGCACGCTGCTGGTGATCCTGCCGCAGGCGCTGAAGCTGGTGATTCCGGGCATCGTCAATACCTTCATCGCGCTGTTCAAG GACACCAGCCTGGTGATCATCATCGGCCTGTTCGACTTCCTCAACAGCATCAAACGCGCCACGGCGGACCCGGCCTGGCTGGGTATGTCCACCGAGGGCT ATGTGTTCGCCGCGCTGGTCTACTGGCTGTTCTGCTTCGGCATGTCGCGCTATTCGATGCACCTGGAGCGCAAGCTCGATACTGGTCACAGGAACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGAGGGTTATGAGCGATACCGTGGCACGACCGGAGCAGGCGAGCGAGCCGGTCATCCTCATGCAGGGCGTGCACAAGTGGTACGGCCAGTTCCATGTGC TCAAGGACATCAACCTGAGCGTGCGCCAGGGCGAGCGCATCGTGCTCTGCGGGCCGTCCGGCTCGGGCAAGTCCACCACCATCCGCTGCCTCAACCGGCT GGAGGAGCACCAGCAGGGACGCATCGTCATCAACGGTGTGGAGCTGACCAGCGATCTCAAGCACATCGAGACGGTTCGCAGCGAAGTCGGCATGGTCTTC CAGCATTTCAACCTGTTCCCGCACCTGACCGTGCTGCAGAACTGCACGCTGGCACCGATGTGGGTGCGCAAGCTGCCGCGCCGCCAGGCCGAGGAAGTGG CCATGCATTACCTGGAGCGGGTGCGCATCCCGGAGCAGGCCGGCAAATATCCCGGCCAGCTCTCCGGCGGCCAGCAGCAGCGCGTGGCGATTGCCCGGGC
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| Amino Acid Sequence |
>amino acid ABC transporter permease
MTTHHFKPDLPPPSSNLGAIGWLRANLFSGVGNTLLTLLGLYAIWLVIPPLLDWAIFSADWSGETRADCTREGACWVFVRARFSQFMYGFYPAELRWRVD FSVWLAIIGATPFFLRQMPHKVRYGFAYLLSYPLLAYWLLHGGFLGLQTVSTSQWGGLMLTIVIAAVGIAGALPMGILLALGRRSDMPAIRVLCVTFIEF WRGVPLITVLFMSSVMLPLFLPEGMNLDKLMRAMLMVIFFEAAYIAEVVRGGLQAIPKGQYEAAAALGLGYWRSTLLVILPQALKLVIPGIVNTFIALFK DTSLVIIIGLFDFLNSIKRATADPAWLGMSTEGYVFAALVYWLFCFGMSRYSMHLERKLDTGHRN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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