Strain | Pseudomonas stutzeri TS44 Contig00003, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GACCATTGCCCGCCTCGAAGGCGCGGGGCCGGCGCACTGGCTCGATGGTCAGGCGCTGTTCGGCGGACTGTATCTCAACGAATTACTGATCCGCCTGCTG CCGGCCGAGGACGCCCATCCGGCACTGTTCGAGCATTACCTGGCTACGTTGCCGGCGCTGGCGGCGCACCGGCCGCTGGAACCGCTGCTGCGGGCGTTCG AATGGCGCCTGCTCGATGAACTGGGCTATGGTTTCGCCCTCCAGAGCGATATCGGCGGCCGGCCGATCGAGCCGCAGCGCCTCTATCGTCTGCTGCCTGA CGCCGGGCTGGAGCCGGTCGAGTCGTTCCAGCCTGGGCTGTTCAACGGAGCCGAGCTGTTGGCGATGGCCGAAGCCGATTGGCAGGTGCCCGGCGCGCTC GCCGCCGCCAAGCGACTGATGCGCCAGGCGCTGGCACCACATCTGGGTGGCCGACCGCTGGTCAGCCGCGAACTGTTCATGAGCCTGAAGGAGGCCCCGC
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DNA Sequence for Gene |
>YO5_03177
GTGACTGAAGCCAATCGAATTCTGCTCGGCGTCAACGTCGATCATGTTGCCACCCTGCGCCAGGCGCGTGGCACGCGTTACCCGGACCCGGTCAAGGCCG CGCTGGATGCCGAGGAGGCCGGGGCGGACGGTATCACCGTGCATCTGCGCGAGGATCGCCGGCATATCCAGGAACGTGACGTGCTGCTGATGAAGGACGC CCTGCAGACGCGGATGAACTTCGAGATGGGCGTCACCGAGGCGATGCTCGCCTTCGCCGAGCAGTTGCGTCCGGAGCATGTCTGCCTGGTGCCGGAGACT CGCCAGGAACTGACGACCGAGGGCGGCCTGGATGTCGCCGGCCAGGAAGCGCGCATCCGTGCCGCGGTCGAGCGCCTGCAGGCCTGCGGTGCGGAGGTTT CGCTGTTCATCGATGCCGACCCGCGACAGATCGAGGCGGCGGCACGCATCGGCGCGCCGGCCATCGAGTTGCACACCGGCCGCTATGCCGATGCGCACGG CGTGGCCGAGCGCGCCGGCGAGCTGGAGCGCATCCGCGAGGCGGTCGAGGCCGGGCTGGGCCAAGGGCTGATCGTCAATGCCGGCCACGGGCTGCATTAC CACAACACCGAGGCGATCGCCGCGATCCGCGGCATCAACGAGCTGAACATCGGCCACGCCATCGTCGCGCATGCGCTGTTTGTCGGATTCAAGCAGGCGG TGGCGGAAATGAAGCAGCTGATTCTCGGTGCCGCCGTCCGCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTCGGCGGCCGTCTGTCAGGGCTTGCGCGCCAGCAGCACGGCGCGCATCGGCGCCGGCAGGCCCTCCACGGTCCTGCTATGGTCCTGCGGATCGAGGAAG TCGGGCAGCGACTGGTAGCGCATCCATTCGGTGCTGCGCTGTTCTTCGACGCGGGTCACGCTGACATCCACGCAGCGCACGTCGACGAAGCCGGCCCGGC GCAGCCAGAGTTCCAGCGCCGGTACCGACGGCAGGAACCAGACGTTGCGCATCTGTGCGTAACGGTCCTCGGGCACCAGCGCGGTGTTCTCGTCGCCGTC GACCACCAGCGTCTCCAGCACCAGCTCGCCGCCACGCACCAGGCAGTCCTTGAGGTCGAGCAGATGATCGATGGGCGAGCGGCGGTGGTAGAGCACGCCC ATCGAGAAGACCGTGTCGAAGCCTTCGAGCTTCGCCGGCAACTCCTCCAGCGCGAAGGGCAGATGCCAGACCGGCAGCTGCGGCAGATAGCGCTTCATCG
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Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTEANRILLGVNVDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLMKDALQTRMNFEMGVTEAMLAFAEQLRPEHVCLVPET RQELTTEGGLDVAGQEARIRAAVERLQACGAEVSLFIDADPRQIEAAARIGAPAIELHTGRYADAHGVAERAGELERIREAVEAGLGQGLIVNAGHGLHY HNTEAIAAIRGINELNIGHAIVAHALFVGFKQAVAEMKQLILGAAVRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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