Pseudomonas sp. S9, PSES9_RS0120520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGTGCCTGGTTAACCTGCATCCAGGCATTCATGGCGTCTTCCCCGGTATCGCCAAGTGCGCGTTGCAGCATCTTCGCCTGCTCGCGGCGCAGGGCCAGTT CCAGCTTGGCACCTTCTGCGGTGAAGGCCAGCAGGCGCTTGCGCTTGTCATCCACCGACGCCTGGCTTTCTACCAGGTGCATTTCAATCAGCTGACGCAG TGGGATGTTCAACGCCTGTTTGCTGACACCCAGGTAATTGAGCAGCTCTTTCATGCTCAAGCCTGGATACATGGCGATGAAAAACAGAATGCGGTGGTGC ACGCGAGACAGTCCACGCCGCGCCAGCATTTCATCTGCCTTGGCAGTAAATGCCTGGTAGCCAAAGAAGAAAGCCTTCATGGCGGACTGCTGAGCGGCTA AGTTTTTAAGGTCAAACATATTGACGTATCTGCATGAGTGGGCGTAGTTTCGGTCAACAAGTTTGACTTACTTCCGACAAATAATCACCTGGTGTAAACG
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| DNA Sequence for Gene |
>PSES9_RS0120520
ATGGCCTTCTCTGAACGTATTGCCCGCCTGAAAAGCTCTTTGATTCGTGAAATTCTCTCCGCGGCGCAGCGCCCTGAAGTGATGTCGTTTGCCGGAGGAT TACCTGCAGAGCCGATGCTGCCGAAAGTCGATTGGGCGCAAATGCCAGCCAATATCGGCCAGTACGGAATGAGTGAGGGCGAGCCGGAGTTGCGTGAGGT GATCGCCGCAGAAGCCCGTGCCCTGGGGGTGCCCTGCGATGCCAGCCAGGTATTGATTGTCAGTGGCTCGCAGCAAACCCTGGACCTGGTCAGCAAGCTG TTTATCGATCCGGGGACCGAAGTACTGGTTGAGGCGCCAACCTACCTGGCTGCATTGCAGGCTTTCCAGTTATTTGGTGCTGATTGCATCGCCGTACCGC AGGAGGCCGATGGTCCGGAGCTCGCGGCTCTGCGCCAGCGTCTGGAAAAGCATAAGCCTGCATTCGCTTACTTGATTCCAACCTTCCAGAATCCATCGGC AGTCCGTTACAGCGAAGCCAAGCGTGATGCTGTTGCCGCATTACTCGACGAGTTTGGAGTAACCCTGATCGAGGATGAGCCCTATCGTGAGCTGGTGTTC GATGAGGGGAGCGCAACCCCGATTGTCAGCCGCTTGCAAAAGGCGAGCTGGGTCTACACCGGTACCGTATCCAAGACATTATTGCCGGGGCTGCGTGTGG GTTATCTGATCGCCACCCCAGATCTGTATCCGCATCTGTTGCGCCTGAAGCAGTCGGCTGACCTGCATACCAATCGCATTGGCCAATGGCAGGCGCTGCA GTGGCTGGGGAGCCAGCATTATCGTGATCACCTGGCGCAGTTACGTCAGTTCTATCGTTTACGTCGCGATGCCATGCAGGCCGCATTGCTCGAGCACTTT GCCGACCTGGCTGATTGGGAGATCCCGCAGGGCGGGTTGTTCTTCTGGCTGACACTCAAGCAGCCATTGGATACGCGTACTCTGCTGGGGCCTGCGCTGG CACAGAACATTGCCTTTATGCCGGGCGAGCCTTTCTTTATCGATCCGGACCAGAATCCTGGGCACCTGCGCTTGAATTTCAGTCACGTCGCGCCTGAGCG CTTGAGTGAAGGCTTACAGCGCCTGGCAGGAGTGATCCGTGTTGCGCAAGCAGAGGTGGCTGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCCGGTACAGGGCGACCATTGTTGATTCGTTATCAGCCATTGCGAGGCGTAGGCCTCGCACAAACAGGAGTAGGGCGATGTTGAAGGTCTATGGCGATT ATCGTTCAGGCAACTGCTACAAAATCAAGTTACTGCTCAACCTGCTGGGCATGCCTTATGAGTGGATAGCCATTGATATCCTCAAGGGCGAAACGCAAAC CGAGGCATTTCTGGCCAAGAATCCTAACGGCAAAATCCCGGTGCTTGAGCTTGAGGACGGCACCTGTCTTTGGGAGTCAAATGCGATTCTCAACTACCTT GCCGAAGGCAGCCGGTTCTTGCCGACGGAACCGCGCTTGCGTACCCAGGTGCTGCAATGGCAGTTTTTCGAGCAGTACAGCCATGAGCCAAGTATAGCCG TGGCGCGTTTTATCCAGCTGTATCTGAACATGCCTGAAGAGCGCTTGGCCGAATACCAGCGCTGCCATGTGCTCGGATACAAAGCGCTGAGAGTCATGGA
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| Amino Acid Sequence |
>GntR family transcriptional regulator
MAFSERIARLKSSLIREILSAAQRPEVMSFAGGLPAEPMLPKVDWAQMPANIGQYGMSEGEPELREVIAAEARALGVPCDASQVLIVSGSQQTLDLVSKL FIDPGTEVLVEAPTYLAALQAFQLFGADCIAVPQEADGPELAALRQRLEKHKPAFAYLIPTFQNPSAVRYSEAKRDAVAALLDEFGVTLIEDEPYRELVF DEGSATPIVSRLQKASWVYTGTVSKTLLPGLRVGYLIATPDLYPHLLRLKQSADLHTNRIGQWQALQWLGSQHYRDHLAQLRQFYRLRRDAMQAALLEHF ADLADWEIPQGGLFFWLTLKQPLDTRTLLGPALAQNIAFMPGEPFFIDPDQNPGHLRLNFSHVAPERLSEGLQRLAGVIRVAQAEVAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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