Pseudomonas sp. S9, PSES9_RS0120405
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig12, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCATTTGGCCCTGTAGCGCTGCCTATATTTATCCAGGAGATAACCTAATGGCCCTGTCTGCAACCAGGCAAGTTCGTATCGCCAATACTGCTGCCTC GAAAGCAACGCGCCCCGCCATCTGCTTGAAAGCATGGCTTGCGGATACAGGCGCGTTGTGATTGGCTGGCGGCGTGGCGATATTGGGGTAACCTGGCAAA AACAAAAGTGCGACCTGAAGTCGCACCCTGTCGACCAGTGGCACCCAAGACTGTGGACATGAGCTAATCTTGTTGGCATTCGCCACGCTGCACAAAGCAT AAGGCGATCCCCATCTTTGCTTAACAGCAAATTGGTCTAGAGTGCTGTTAATAAAGCGTTTTTGAAATGCTCAAAATGCTTTTTAAATGCCTTTAGACCC TGATCGTGACGGCATGTATCGTTGCAATGCCTTACTGCTTTATACATACTTGCCGCCGATTTTTATCCCTAAAAAATCCATTAACCGTGGAACCCCAGCA
|
|
| DNA Sequence for Gene |
>PSES9_RS0120405
ATGAGCACAGCAATCAGTCCGACTGCTTATAACTACAAGGTGGTCCGCCAATTCGCCGTCATGACGGTAATTTGGGGGGTCATTGGCATGGGCCTAGGCG TTTTCATCGCTTCACAACTCGTGTGGCCTGAACTCAACTTTGGCTTGGAATGGACGACCTTTGGTCGTTTACGTCCTCTGCACACTAACGCGGTGATTTT CGCTTTTGGCGGATGCGCGCTAATGGCAACTTCACTTTATGTGGTGCAGCGCACCAGTCAGGTACGTCTGATTTCTGACTCCTTGGCATCTTTTGTCTTC TGGGGTTGGCAAGCAGTTATTGTTGCCGCAGTTATTACTCTGCCGCTGGGCTTTACCAGCTCTAAAGAGTACGCAGAACTGGAATGGCCAATCGACATCC TTCTGGGTATCGTCTGGGTCGCTTATGCGGTTCTGTTCTTCGGCACTATTGTCAAGCGCAAGCCTAAGCACATCTACGTCGGCAACTGGTTCTACGGTGC ATTCATCCTGGTTACGGCAATGCTGCACATCGTAAACAGTGCAGAAATGCCTGTGAGCATGTTCAAGTCGTATTCGATGTACTCGGGTGCAACAGATGCC ATGATCCAATGGTGGTACGGCCACAACGCCGTAGGTTTCTTCCTGACCACCGGCTTCCTGGGCATGATGTACTACTTCGTACCCAAGCAGGCTGAGCGTC CAATCTACTCGTACCGCCTGTCTATCGTGCATTTCTGGGCACTGATCACCCTGTACATCTGGGCCGGCCCACACCACCTGCACTACACCGCACTGCCGGA CTGGGCCCAGTCCCTCGGCATGGCCATGTCGGTCATCCTGCTGGCGCCAAGCTGGGGCGGCATGATCAACGGCATGATGAGCCTGTCAGGCGCCTGGCAT AAGCTGCGCACCGACCCTATCCTGCGCTTCCTGGTGGTTTCGCTGGCGTTCTACGGCATGTCGACCTTCGAAGGCCCGATGATGGCTATCAAGACCGTCA ACGCCCTGTCCCACTACACTGACTGGACCATCGGCCACGTTCACGCTGGTGCGCTCGGCTGGGTTGCGATGATCTCCATCGGTTCGCTGTACCACCTGAT CCCGAAAGTCTTCGGTCGCGAGCAGATGCACAGCGTCGGCCTGATCAATGCCCACTTCTGGTTGGCTACCATCGGCACCGTTCTGTACATCGCCTCGATG TGGGTAAACGGTATCACCCAGGGCCTGATGTGGCGTGCAGTGAACGAGGACGGCACCCTGACCTACTCGTTCGTTGAAGCCCTGCAAGCAAGCCACCCTG GCTATGTAGTTCGCGCAATTGGTGGCGGGTTCTTCGTCCTTGGTATGTTGCTGATGGCTTACAACACCTACCGCACCGTGCGTGCCGCCAAGCCGTCCGA GTATGACGCCGCGGCAATGATTCCTGCCGGAGTAGCTCACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TGAAACACGAAATCATCGAGAAAAATATTGGCTTGATGGCCCTGTTGATGGTGCTATGCGTCAGCATCGGCGGCCTCACCCAAATCGTCCCGTTGTTTTT CCAGGACGTCACCAACGAGCCGGTTGAAGGCCTCAAGCCCTACACTGCTCTGGAACTCGAAGGCCGTGATGTATACATCGCCAACGGCTGCGTCGGTTGC CACTCGCAAATGATCCGTCCGTTCCGTGCTGAAACAGAGCGCTACGGTCACTACTCGGTTGCCGGTGAGAGCGTCTGGGATCACCCATTCCTGTGGGGCT CCAAGCGTACCGGTCCCGATCTGGCCCGTGTTGGCGGTCGCTACTCGGATGAGTGGCAGCGTGCCCACCTGTATAACCCACGCAACGTAGTGCCTGAGTC GATCATGCCGGCATTCCCGTTCCTGGTTGAGAAGAAGCTCGACGGTAAGGACACTGCGAAAAAGATGGAAGTCATGCGTGGTTTCGGCGTGCCTTACACC
|
|
| Amino Acid Sequence |
>cytochrome oxidase subunit I
MSTAISPTAYNYKVVRQFAVMTVIWGVIGMGLGVFIASQLVWPELNFGLEWTTFGRLRPLHTNAVIFAFGGCALMATSLYVVQRTSQVRLISDSLASFVF WGWQAVIVAAVITLPLGFTSSKEYAELEWPIDILLGIVWVAYAVLFFGTIVKRKPKHIYVGNWFYGAFILVTAMLHIVNSAEMPVSMFKSYSMYSGATDA MIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMAMSVILLAPSWGGMINGMMSLSGAWH KLRTDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGSLYHLIPKVFGREQMHSVGLINAHFWLATIGTVLYIASM WVNGITQGLMWRAVNEDGTLTYSFVEALQASHPGYVVRAIGGGFFVLGMLLMAYNTYRTVRAAKPSEYDAAAMIPAGVAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|