Pseudomonas sp. S9, PSES9_RS0116180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGTGCTCGATAGAGACAAGATCAACAGTTGCAGGCCTGTATATGAAGCCTTGCTCAGCCATGGGCATACCCACACCCGGTTGCAGGAACAAGGTAACCGA CAAGCCACAAAGCAAGGACAACAGCGACATTAATTGCCAAAAGCCAACCGTGCTCAGGCCAAGCTTCAAGCTCGCGCCGTAACCTCGCAAGCCGGCGACG CTTGAAGCAATAAGTACGAACATCACAATCGGTGTGATCAAGCGCACCACTGCAATAAACAGGTCACTGAAGGCTTTCATCTCGATCGCCAGCGAGGGCT TCCAGACACCCAGGAGGCTACCAAGCACTACCGCCAGCACTAACTGAGCAAGGCCTGATCGTACAACTCTGAACATCAGCAGTTCTTAATTATTATTGGT TTGACCCCCTGCGCAGACTGGGGCCTGACATCCTATCCCATCACTCGTGGATTCGGTATCGTGCAGCGCAGTTACTCATTCGACACATGGTGAACTGATC
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| DNA Sequence for Gene |
>PSES9_RS0116180
ATGGAATTGCGTCATCTTCGTTACTTCGTCATGGTCGCCGAGGAGCAACATTTCACCCGTGCCGCTGCCCGGCTCAACATGCAGCAGCCACCCTTGAGTC AACAGGTTCGTGCATTGGAGCAGGAACTTGGTTTTGATCTCTTTGTACGCCACCCCAAGGGTGTGGTGCTGACTGCGGGTGGCAAGGTGTTCCTGGGCGA GGCCAAGGATATTCTGCGTAGGGTCGAACTCGGTTCACTCAAGGCGGCGCGAGCCGCTCAGGGCATAGAAGGCACATTGAGCGTCGGCTTCACCAGTTCG GCAGCTTCACACCCGCTGATTCCGCAGATTATTCGCAACTATCGTGAGCGCTATGCAGGGGTGGATATCAGTTTGCATGAGGGCAATGCCAGCGAGCTGA CCGAAAACGTCATGGCCGAGCGTACCGACATCGGCATTCTTCGCGCGCCTGTCGCGCACCCCAAGGCTTCTCAGTACCAGCACTTGTTGAATGAAGAATT ATTGCTGGTCCTGCCTTCAGGTCACTCGTTGCTCAAAGGGCAATCGTCCGCCATTGAAATGAGTGTGTCGTTGGCCGATCTGGTGGATGAGCGCTTTATC CTAGTTCGTCGCCCTGGAGCACCCGGCATGTATGCCAACCTCGTGCAGGCTTGCCGCAACGCCGGTTTTGAACCGACGATTGCCTTTGAGGTTGAACGCA TGTTGACCAACGTCAGTTTGGTGGCTGCGGGTGCAGGCATCTCGGTGGTGCCGGCTTCCATGCAGGGCTTTCATGAGGGGAGCGTCGTCTATTGTCGTAT ACGCGATGCCAAGCCTCGATTGACCGCGCCTGTCACATTGCTGTGCCGCAGTTTTAATCAATCGCCGCCGATCACCCATTTCATCGAACTGGCCCAGCAG TTAAGCAGCCAATACCGCAAGCGCTCGATGTCCAGGAGCCGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAAGCTGGATAGCGAATAATCCGAGGGCCTTCCTGAGGCCTGGATATTCGATCATGCAGAACTTTTGCCTAGCAGTCAGTGGCTTCGTTGTTATCTAAG TAAAGTTTTTCTCCGGGGGTAACGATAGGTTGGTTACCAACCAAGGAGGGTACTGTGATGATTTTACGAAGACTGAAATTGGCTCCCCGTTCGGTTATTT GCTTTGGCTTTTTTTGTCTGATTATCGTGGCGATTGGACTGCTGTCCTTATACCAGGCAAACAAGCTTAACGACTTTGAAACGTACGTTGAGGTCAACGT CCTGGGCAGTATCAAAACCGTCGGCGAGGTGGGTGAAGAGTTCGCGAGGATTCGAGCCAATAATGCTCGCCTGCGCAACCCTATCGAACCTAAAGCACGT ACCACCAAGGCGCTCAATGACATCAAGCAAGCCAGAGTGCGGATAAGCGGTCTTATGAAGTCGCTACTGCCATTCGTGACCACTGCGGACGGGCGCGAAG
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MELRHLRYFVMVAEEQHFTRAAARLNMQQPPLSQQVRALEQELGFDLFVRHPKGVVLTAGGKVFLGEAKDILRRVELGSLKAARAAQGIEGTLSVGFTSS AASHPLIPQIIRNYRERYAGVDISLHEGNASELTENVMAERTDIGILRAPVAHPKASQYQHLLNEELLLVLPSGHSLLKGQSSAIEMSVSLADLVDERFI LVRRPGAPGMYANLVQACRNAGFEPTIAFEVERMLTNVSLVAAGAGISVVPASMQGFHEGSVVYCRIRDAKPRLTAPVTLLCRSFNQSPPITHFIELAQQ LSSQYRKRSMSRSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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