Pseudomonas sp. S9, PSES9_RS0115785
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig8, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTGGCAATTACGCACTAAAACTGTGCTTCGACGACGGCCATGACAGCGGCCTGTACAGCTGGGACTACCTGTACCAGCTAGCCACTCGTCAGGAACAG CTCTGGGCAGACTACCTTGCCGAACTGCGGGCCGCCGGAAAGTCGCGCGATCCCAACGAGTCAATTGTCCGGCTCATGCAGTAACAACCGCAGCCCGCCG CGCAGAACGACGCGCACCAAAGCGGCCATTTCAGCGCTCGCGATCAAGACCAGGCGCACAGTTAGAACGCATTTTCTAATATCTGAAGGCATACTGCTGC CAAGCAGAAACTGCGCACGCCTTGCGTAAAGTTAAAAACTCGGGTAACCAAGTAACTGGCAAGTTACCTGCATCTGGTGCTCCGGATGCATGCAGTAGTG ATATTAATTACACAGGGTAACCCGAGTCATACCGAGCCTTGCATTATGTCCATGCGCATAATGCATTTGCGGTAGCTGTCTCTGGACAATGGAGCGTCAA
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| DNA Sequence for Gene |
>PSES9_RS0115785
ATGGCTGATAAAAATAATGATGCTCTGAAGCAACAAGCTTCAGAACACACCCTAGGCCTTAATCCCGTTGTTGGGATCCGCGGCAAAGACCTGCTCACAA CGGCGCGGATGGTTCTGTCCCTCGCGCTGAAACAACCTTTGCACAGTGCCAAGCACGCCGCTCATTTTGGCCTTGAGCTCAAGAACGTCATGTTTGGCCA GTCTGACCTGGAGGTTGACCCGACTGACCGGCGTTTCAGTGACCCGGCCTGGAGCCAGAACCCGCTCTATCGACGCTACCTGCAAACCTACCTGGCCTGG CGCAAGGAACTGCACCAGTGGATCGACGAAAGCACCTTGTCACCCCAGGACGCCAGCCGTGGCCATTTCGTGGTCAACCTCATGACCGAAGCCATGGCGC CAAGCAACTCCCTGGCCAACCCCATGGCGGTCAAGCGGTTCTTTGAAACGGGCGGCAAAAGCCTGCTCGACGGCCTCTCCCACCTTGCCAAGGACCTCGT CAACAACGGCGGCATGCCAAGCCAGGTCAATATGTCGGCCTTCGAGGTTGGCAAGAACCTGGCGACCACCGAAGGCGCCGTGGTCTTTCGCAATGACCTG CTCGAACTGATTCAGTACGCCCCGGTCACCGAGCAAGTGCACCAGCGGCCACTGCTGGTGGTGCCACCGCAGATCAACAAATTCTATGTATTCGACTTGT CGGCGGAAAAAAGCGTCGCCCGCTTTCTCCTGCGCAGCAGCATACAGACCTTTGTCGTCAGTTGGCGCAACCCGACCAAAGCCCAGCGCGAGTGGGGCCT GAGCACTTACATCGAAGCCCTTAAAGAGGCAATTGATGTGGTCTGCGCCATCACCGGCAGCAAAGATGTCAACATGCTCGGCGCCTGTTCCGGCGGTTTG ACCACAACATCCTTGCTTGGCCATTACGCTGCGCTGGGCGAGCAGAAAGTCCATGCATTGACCCTGCTGGTGAGTGTGCTCGATACCCAGATGGATACCC AGGTCGCACTGTTTGCCGATGAGAAAACCCTTGAAGCGGCCAAGCGCCGCTCCTATCAAGCGGGCGTGCTCGAAGGCAGCGACATGGCCAAGGTATTTGC CTGGATGCGACCCAATGACCTGATCTGGAATTACTGGGTCAACAACTATCTGTTGGGTAACGAGCCACCTGTTTTCGATATCCTGTACTGGAACAACGAC ACCACGCGCTTGCCGGCGGCCTTGCATGGCGAGTTCATTGACATGTTCGTGACCAACCCATTGACACGCTCGGGCGCGCTGGAAGTCTGCGGCACCCCGA TCGACCTTAAGCAGGTTAAAAGCGATCTGTTCTGCGTCGCGGGCAATACCGACCACATCACGCCCTGGGAATCCTGCTACAAGTCAGCGAAGTTATTTGG TGGCGAATGTGAGTTTGTTCTGTCCAACAGCGGTCATATCCAGAGCATTCTCAATCCGCCGGGCAACCCAAAGTCACGCTACATGACCAATAGCGAAATG CCCGATGACGCCAAAGACTGGCAGGCAAGCGCTACCAAACACACCGATTCCTGGTGGCTGCACTGGCAACAGTGGCTCGCGCAGCGCTCAGGTGAAACCA AACCGGCGAAAGCCCAGCTTGGAAATAAGAAATACCCGGCCGGTGAAGCCGCACCGGGCACTTATGTACACGAACGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACTGGGAACTCTGGAGAATGTAGCGCGCGACGATAGAGCAAGGTGAAACGGCCAGCGGGAGTAGCCGAAGGGCGAACGCAACCTCCCTCACATTATCGA GCGCAGTAGTTTTCAATGGTTGCCTAATTGCGCACTGCGCACCCATGCCTGCAGCGCTACCAAGCGCTGCTCGCTGAAACTCAGCGGAACAGGATTCTCT GGTGGCTATAGCCGGGACCGTCCACTCCAACGGTTTAACTGATAGGGTTATGCGTATGTCGCTACCATTTGTATTTCGCACCATCGAGCTGGATGGCCAG ACAATCCGGACTGCGGTTCGGCCCGGAAACAGCAAGATAGCGCCGCTGCTGATCTTCAATGGCATAGGCGCCAACCTTGAGCTGGTCATGCCGTTCGTTA AAGCACTCGACCCCGAGCTTGAAGTCATTGCCTTCGATGTGCCCGGGGTGGGCGGCTCATCCACGCCCAGTACGCCGTATCGTTTCCCCGGGTTGGCCAA
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| Amino Acid Sequence |
>poly(R)-hydroxyalkanoic acid synthase
MADKNNDALKQQASEHTLGLNPVVGIRGKDLLTTARMVLSLALKQPLHSAKHAAHFGLELKNVMFGQSDLEVDPTDRRFSDPAWSQNPLYRRYLQTYLAW RKELHQWIDESTLSPQDASRGHFVVNLMTEAMAPSNSLANPMAVKRFFETGGKSLLDGLSHLAKDLVNNGGMPSQVNMSAFEVGKNLATTEGAVVFRNDL LELIQYAPVTEQVHQRPLLVVPPQINKFYVFDLSAEKSVARFLLRSSIQTFVVSWRNPTKAQREWGLSTYIEALKEAIDVVCAITGSKDVNMLGACSGGL TTTSLLGHYAALGEQKVHALTLLVSVLDTQMDTQVALFADEKTLEAAKRRSYQAGVLEGSDMAKVFAWMRPNDLIWNYWVNNYLLGNEPPVFDILYWNND TTRLPAALHGEFIDMFVTNPLTRSGALEVCGTPIDLKQVKSDLFCVAGNTDHITPWESCYKSAKLFGGECEFVLSNSGHIQSILNPPGNPKSRYMTNSEM PDDAKDWQASATKHTDSWWLHWQQWLAQRSGETKPAKAQLGNKKYPAGEAAPGTYVHER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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