Pseudomonas sp. S9, PSES9_RS0113305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCAGGCCCATTTGCCCGCCAGCACTCACGGTCACCTCGCGATAAAAGCCTTTGCGCTCATGCACGCAATGCTCGTTGCGGGTTAAAGCCATCACATAA CCCAAGTCGCCCAGTGCCGGCAGCAACTGCGCCCAGTCAGGGCGCAATCGCACGGTATCGACAGCCAATCGGCTGGCAACCAGTTCAGCCTCACTGACAC TCAAGTGCGCAGCCGCATCGCGTGCGCGCAGTCGAGGCTGAGCGCCACGTAGTTGTTGCCAGTTTCGATATAGATCACAGACCTGTGACGAGTTGAGATT ACTCATGACTGAACGGCTCCTAATGAACGGTTTTTCCACTGCCGCACGACGAATGTCTGCGCCAGCAAAGGACGGTTGGCATTTTTTCTTTACTAACTAG ATTTGATAATCATTTGCATTAGCATATCAATCTCATTACTGTTTGCGCAAATTCCAACAAGCACTCACAGAAGCTGCCCAACACACCTTTAGGAGTTTTC
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| DNA Sequence for Gene |
>PSES9_RS0113305
ATGTTTGCTACAGCACCCTTCCCCTTGCGTTCATACCTGGCGCTTATGTTGCTCGGCCCTTCCTTAAGCCTTGCGGCAACAGAACCGGCCAAACTCGCCG ACACAGAGGTCACCGGGACACCCATACAAGCGCCTTTGCCGACCACCACACGCACCGATGCCGAAGCGCTGGACAAGCGTTTTATTCGCAGTTTTGACGA CCTGGGGCGGCGCTCGGAACCGGGGGTAAATTTCAACCGCAACAATGAGAGCATCAATATTCGCGGGCTTGACCGCGATCGTGTGCTGACCACAATCGAC GGGATTCGCGTGCCCTGGATGACGGATGGCGCACGCAGCCAGGGGCCAACTGGCGGTGCCCAGGGCGGCTTGGATGCAATTGATTTCAACAGTTTGTCGG CGGTGGATATCGTTCGCGGCGCCAACTCCAGCCAGGCAGGCTCAGGCGCCCTCGGTGGTGCAGTGCAACTGTTCACCCTCAACCCGGATGACCTGCTCAG CGAAGGACAAGACTTCGCAACCCTGGCCAAAACCGACTACGACAGCGCAGACAATAGCTGGGGGCTCAATGCAGCGCTGGCGGGCCGCTACAACCACACC AAATGGTTACTGCAAGCAGGCAAACGCCAAGGCGACGAGCTCGAAACCTCGGGGAACGACAACCTGCTGGGCGCCGGACGCACCGAGGCCAACCCGGCAG ATGTCGACCGGCACAATGCCTTGCTCAAGCTGCAGCAAGGCTTCGATGGTGGTCACCAGCTAGGCTTCACCGCCGAATACTTCAAGCGCGAAAATGACAT CGACACCCGCACTGGCCAAGGCAGTACTTATCTGGCCGGTGAAAACAGTACCCAGGAAGACACCAAGCGCCAACGCCTGTCGCTGGACTATGACTTCAAG GCACAAGACAGCGACGGCTGGCTCGACCGTGCCCATGCAATCACCTACTGGCAGAAAATCGAGCGTGAAGACGACCAGGATGCCGTGCGCGCCCTCGATT CCCGTGCAGGTATTCCCGACTTTGTATTCCAGATGTTTGGCTTGCCAGAAAACCCCTACAAATACCCAAGCGGGGTTTTCCAGCGTAACAACCGTATCGA GAAAACCCTGTATGGCTTCACTGGTGAAGTGGGTAAAAAAAAGCAGTTGGTGGGCCTGGATCATGACTTCAGCCTGGGCGGCGAACTGTATTGGATCGAA ACCCAGCAAGCCTCAAAAGGCCAGGATAACTGCCCGGCCAACCTGGTTTCACCCTCACCGAGCTCACCCGTCTACATGGGCCCGAGCGCGTGTGATTTCC TGCACACCAACCAGGCCGACAGCCCTGAAGCCAAAGGCCGCCAATGGGCAGTGTACGCTGCAGATGAAATCAGCTTTGCCGATGGGGTATTCAAGCTGAC CCCGGGCTTGCGCTACGACGCCTATAAAGTCGAACCCGACGCAGGCGGCGACTACGCCGATAACGTCAACCCCAATAACAACTCGTCCCTTACCGACAGT GATGACAGCAAGCTGTCCGCCAGCCTGTTGGCCACCTGGCAGGTGGCCGAGCAAGCGCTGCTTTATGCGCAATGGGCGCAAGGTTTCAAAGCACCGGACG CCACCCAGTTGTACATGAACTACGGCGCCTCGGGTACTTATCTGCGCGTGGGCAACCCGGATCTCAAGCCAGAAGAAAGCAACGGTTACGAGGTGGGCGG CCAATTCGGCAACAACCAGTTGGGCGGTTCGCTGAGCCTGTTCGCCAACCATTACAAGAACTTTATTGATGAAGGCGTGCTGCTCGACAGCCAGCAAGTT GCCGATCTTGGCCTGGATGCCGCTGATTATCCATTCGGTGTGACCCGTACTGAAAACCGCGACAAAGTGCGCATCTACGGCGCCGAAGCGACCGCACACT GGGGCTTTAGCAAGGACTGGAAACTTTGGGGTGCAGTGGCCTGGGCGCGTGGCGAAGACCGCAAGACCAATCAAGACCTGAACTCGGTTGCGCCGCTGAC CACCACCCTCGGCCTGAGCTACGAGCATGAGCGCTTTGGCAGCGACTTGATGCTGACCGCAGCCAGCGCTCGCGACAAGGTCGAGACAGACGCCGACTTT AAAGCCCCGGGCTACGGTGTCGTTGACATGACCGCCTATTGGCAGCCCGCAGCGTTGGACGGCGTCAAGCTGCAAGCGGGTGTCTTCAACATCCTCGACA AGAAATACTGGAACGCACTGAACGTACCAGACGGCGCGCTCGTCCAACCCGATGACTACTACAGCGAAGTCGGGCGCAGCGTACGGGTGTCGGCCTCCTG GCAGTACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAACCGCGAGAAATGGTGGATAGAAAAGCGTGATCCACCCTACCCGGCTCAACCCAAACGCCGTCAGTAGGCTGTGACAACGCGAAGCTTGCCCACCAC GGCGCTACCCAGGCTTTCAAATTGCGCAAGGATGCGCACCCTATTCGCCTCCCCGCTAGATGCGTGATAATGCGCACTAATTGTGGAGAGCCTCATGATC TACCTATGCGCCAGCACGGCGCTTGCAGAAAGCCAGAGCCTTGGTTTTGAAGTGGCAGGGCAACAAATCCTGATCGTGCGCAAGGATGCCCAGCTGTTTG CCTACCGCAACAGCTGCCCCCATCGCGGCGTCCCCCTGGAATGGCAGCCCAACCAGTTTCTCGACAGCAGCGCCAGCTTGATCCAATGCGCAACCCATGG TGCCTTGTTCCTGATCGAGTCGGGCGAATGCGTCACCGGGCCGTGCGAAGGTCAATCATTGGCGACCGTTGACTGCGGTGAAGACGCCCAGGGTATCTGG
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| Amino Acid Sequence |
>outer membrane heme receptor
MFATAPFPLRSYLALMLLGPSLSLAATEPAKLADTEVTGTPIQAPLPTTTRTDAEALDKRFIRSFDDLGRRSEPGVNFNRNNESINIRGLDRDRVLTTID GIRVPWMTDGARSQGPTGGAQGGLDAIDFNSLSAVDIVRGANSSQAGSGALGGAVQLFTLNPDDLLSEGQDFATLAKTDYDSADNSWGLNAALAGRYNHT KWLLQAGKRQGDELETSGNDNLLGAGRTEANPADVDRHNALLKLQQGFDGGHQLGFTAEYFKRENDIDTRTGQGSTYLAGENSTQEDTKRQRLSLDYDFK AQDSDGWLDRAHAITYWQKIEREDDQDAVRALDSRAGIPDFVFQMFGLPENPYKYPSGVFQRNNRIEKTLYGFTGEVGKKKQLVGLDHDFSLGGELYWIE TQQASKGQDNCPANLVSPSPSSPVYMGPSACDFLHTNQADSPEAKGRQWAVYAADEISFADGVFKLTPGLRYDAYKVEPDAGGDYADNVNPNNNSSLTDS DDSKLSASLLATWQVAEQALLYAQWAQGFKAPDATQLYMNYGASGTYLRVGNPDLKPEESNGYEVGGQFGNNQLGGSLSLFANHYKNFIDEGVLLDSQQV ADLGLDAADYPFGVTRTENRDKVRIYGAEATAHWGFSKDWKLWGAVAWARGEDRKTNQDLNSVAPLTTTLGLSYEHERFGSDLMLTAASARDKVETDADF KAPGYGVVDMTAYWQPAALDGVKLQAGVFNILDKKYWNALNVPDGALVQPDDYYSEVGRSVRVSASWQY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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