Strain | Pseudomonas sp. S9 Contig5, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCACGGCATTGAGACCACCGTATTGGCCCGTGCCTTATGGCGCCTGGCGCTTGAGGAGGATGATGGCACACGCATCATCGAGTCCGATCAACTGCGCCGG TTAGGCCGCTAACACTGGGAAACGCTGAATATGAGCACTACTCACAACAGCCTGATTGAAGCCCTGGTCGATGCCGACATGCTGGAAATCGACGGCCTGT ACGCCTGGCAATTCAGCCTCGACAAAGAACTGCTCGCACAGGTCAGCGCCGGCTCAGCCAGCACCGACAGCCAAGCCAAGCCGCTGCTGAGCATGGAGTG CATAGACGGCCGCGATCGCCGTCACTGGCAGTTCACCCTGGGCCAGATCAGCGCCGCGACTTATGACAGCAGCAATGAACATTGGAATATCGCAGGGGCC GAACAATCGCATAAGCTCAAGTGCTTCGCCGCCATTACGGGTAACAATGATGACGATGACGAGTCAGAAGCGCAGGACTGACGATTAACAGGACGGGCTG
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DNA Sequence for Gene |
>PSES9_RS0111940
ATGAACCTGTACGATCGCTTTGTATTGCCACGCTTAATTGACTTTGCCTGCGGCATGGGCGAAGTCATGAAGGCGCGCTCCAAGATTGTTCCTCAGGCCC ACGGCAGAGTGCTTGAAATAGGCATCGGCAGCGGTCTGAACCTTGAGTTTTATGACCCGGAAAAAGTCAGCGCCGTGGTTGGCGTTGATCCCTCTGCCGA GATGCAAAAGCTGGCGCGAGAACGAGCTGCCAGAACCCCGATCCCAATTGAAATGATTGCCCTGGAACTTGGCCAGATCAAAGCCGCCGACGCCAGTTTC GACAGCATTGTTTGCACCTTCACCCTTTGCACCATTGCCGACACGGCCACCGCGCTTAAAGAAATGCGCCGAGTGCTCAAGCCACAGGGGCGCCTGCTGT TTTGCGAGCACGGCCTGGCCCCCGACGCCAGGGTAGTGCGCTGGCAGAATCGACTCACGCCCATCTGGAAGCCACTGGCTGGCGGCTGCCACCTAAATCG CGATATTCCAGCCCTGATAAGCGCCGGCGGCTTCAGGATTGGCGAGCTGGACAAACGCTACCTGCAAGGCCCCAAAGCCATGACCTACGTCTATTCGGGC TGGGCGGACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCAAAACAGCACGACTACTGCGTTGCCATGGCCCAAAGGGGCGCGACTTAACGCTTAATCCTGGAAGCCAAGCATGGACGATCAACGCATCCAACTGATC AACAAAATTCCTCTCGGCGCCAGCAAAGCCAAGGCATTCGGCCGTACCTACAGCATTAGCCGCAGCGACTTCAATGCAGGTCAAAGCATCAAGGTCTATG CCGAAGAGCTCGGTGGCACTGACTTTATCAGCTTCAACTACTACATCACCGCCAACACAGCACTGCTCAAACCTTGCGAGATGCCGCAGGAAAAAGTGAT GAGCTTCTTGCGCGAATTTGAATTGATCACGCCCAGCAGTTAAAGACCGCCAGTGACATTCAAGGTACCACCCAGGGCGGTAATCAACGACAAAGGCAAC AGCAGCGTATCGAGCAAGGCACTGAAGGGCAGGTCCAGCCCAGGCATTGCCGGGGCCTGCGCACCAAAGCGGTCCAGCGGGCAACAGCCGCCATTGAGCA
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Amino Acid Sequence |
>phospholipid methyltransferase
MNLYDRFVLPRLIDFACGMGEVMKARSKIVPQAHGRVLEIGIGSGLNLEFYDPEKVSAVVGVDPSAEMQKLARERAARTPIPIEMIALELGQIKAADASF DSIVCTFTLCTIADTATALKEMRRVLKPQGRLLFCEHGLAPDARVVRWQNRLTPIWKPLAGGCHLNRDIPALISAGGFRIGELDKRYLQGPKAMTYVYSG WAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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