Pseudomonas sp. S9, PSES9_RS0109140
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCATTGGCGCTGGCTGCCCGCTGACCAGCGGCGACACTCCACTGCTGACCTGCGACGTCTGGGAGCACGCTTACTACATCGACTACCGCAATGCGCGT CCGAAGTACGTAGAAGCTTTCTGGAACCTGGTGAACTGGGATTTCGTTGCGAAAAACTTCGCGGCCTGATCCAGCGTCACAACAAGCCTCGTGCTTGTTT GAAAAACCCGGCAAACGCCGGGTTTTTTTTGCACTATTTTGTAGATATCGGTAGCGTACTAAAAATAATATGGCCCAACGCCATCCTGGTCAGAAGTACT ACACTAGAAAGTCTGCTTGATGGATTAAAGCCAGAGCCATTATCACCGATATACCAGTATCGCCCCAACAAGCCTAGCAAGCGTGACATCGATTTCAGTA GCCGTGAAGCACTCAACCAGCAATGGCTTTTTGACTGCAACCCTGAGTTTGCCAATACTCTTAGCGCCTTACGGCAACCGGCATCACAAGGATCTATCTT
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| DNA Sequence for Gene |
>PSES9_RS0109140
TTGAAGTTGGAACTGAAAAACAGACTGTCACTGAGATTACTCCGGGTCGTACTGCTGTCGGCATTGATAGTCGGCGTTGTCCTGAGTTGTGCGCAGATTG TCTTTGATGCGTATAAGACCAAACAGTCTGTTGCAAACGATGCCCACCGAATCCTGGGAATGTTTCGCGACCCCTCGACCCAGGCGGTGTATAGCCTCGA CCGAGAAATGGGCATGCAGGTTATCGAAGGCCTGTTCCAGCACGAGTCGGTACAAATGGCTTCGATCGGCCACCCGAATGAGCCGATGCTCGCCGAGCGT GAGCGGCCACCGGCAGAAATTGCAACACGCTGGCTGACCGACCCTATCCTTGGCAAAGCACAGAAATACTCGACCCAATTGGTGGGTAAGGGCCCTTACA GCGAGTATTACGGCGACCTCAACATCACCCTCGACACTGCGGCCTATGGTGAAAACTTCATCACCAACTCGGTGATTATCTTTATCTCCGGGGTACTGCG CGCGCTGGCAATGGGCTTGGTGCTGTATCTGGTTTACCACTGGCTGCTGACCAAGCCGCTGGCAAAAATCATTGAACACCTGAGTGACATCAACCCGGAT CGCCCCAGCGCACACAAGCTGCCGATGATAAAAGGCAACGAGCACAATGAGCTGGGCGTGTGGGTCAATACCGCCAATCAACTGCTCGAATCCATAGAGC GCAATACCAGCCTTCGCCACGAAGCAGAGAACAGCCTGCAACGCATGGCCCAGTATGATTTCCTTACCGGCCTGCCCAACCGCCAGCAACTGCAGCATCA ACTTGATCAGATCCTGAATGACGCAGGCCGCCTGCAACGCCGTGTCGCAGTGCTTTGCGTGGGCCTGGATGACTTCAAGGGCGTCAATGAACAGTACAGC TACCAGGCGGGCGACCAGTTACTGCTGGCCTTGTCTGACCGCCTGCGTGGCCATGGCGGACGGCTCGGCGTCCTGGCGCGGCTGGGTGGTGATCAGTTCG CCCTGGTGCAAGCCGACATAGAACAGCCCTACGAAGCTGCCGAGCTGGCGCAGAGCGTTCTCGATGACATAAGCAACCCCTTCACCCTCGATGACCATCT GGTACACCTGCGCGCAACCATCGGCATCACATTGTTCCCGGAAGACGGGGACAGCACGGAAAAACTCCTGCAAAAAGCAGAGCAAACCATGACGCTGGCG AAAAGTCGCTCGCGTAACCGTTATCAGTTCTATATCGCCAGCGTAGACAGTGAAATGCGTCGCCTACGGGAGCTGGAAAAAGACCTGCGCATCGCCCTCG AGGGCAACCAGCTGCACCTGGTCTATCAGCCGCAAATCAGTTACCAGGCCAAGCATGTGGTCGGGGTCGAAGCCCTGCTGCGCTGGGAACATCCACAACT TGGCTGGATTCCACCCGACCAGTTCATCCCGCTGGCGGAACAGAACGGCAGCATCATTGCAATTGGCGAGTGGGTGCTCGATCAAGCCTGCCGGCAACTG CGTGACTGGCATGATCAAGGCTTCAACCATTTGCGCATGGCAATCAACCTTTCAACCGTGCAACTGCATCACGCGGAACTGCCGAGAATGGTTAACAACC TGCTGCAAATGTATCGCTTACCTGCGCGCAGCCTTGAGCTGGAAGTCACCGAGACCGGCCTGATGGAAGATATCAGCACCGCAGCCCAGCACTTGCTCAG CCTGCGCCGCGCCGGAGCACTGATCGCGATTGACGACTTCGGTACGGGTTATTCCTCATTGAGCTACCTCAAGAGCCTGCCGCTGGACAAGATCAAGATC GATAAGAGCTTCGTTCAGGACCTGCTCGAAGATGAAGACGACGCAACCATCGTCCGCGCCATCATCCAACTGGGCAAGAGCCTGGGCATGCAGGTTATCG CCGAGGGCGTCGAAACGGCTGCCCAGGAAGCCTACATCATCAGCGAAGGCTGCCACGAAGGTCAGGGCTACTTTTACAGCAAGCCATTGCCGGCCCGTGA ACTGACTCTCTACCTCAAGCAAGCGCGGCGCATACATGCAGCCTCAGACTCGGCCGCCTTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGCCTGCGAATCTACAGCTGGGCTCAGTGCTGAAGCCCAAGCTGCCATGCAAGGCTCAGCGCCCCCACCAGGCACAGGGCCGCGCCGCCCGCAGCCTGC CAGTAGTACCCTCGCGCCAGCTCATCCTCACCCGTGGTTGAAAGCACAAAGGGTTGCGCCTCCCGCGGTTTGGCCATGTGATGCTGAACCGGCCTGAGGC TCTCAAGCCTATGACGATCCTCGGCCTCCAACTGCGCAGCCAAGCGCACACGACTCCACTCCTGCTCATCAAGCTGGCCATTGTTATCGCTGTCGAAACG CTGTAACAGGCCAGAAAAGTCGGACTTCCATTCACGAATCACGGCACCTTGCTGCGCGGCCAAATCCAAGCCCTGACGGCCGCCGCCGGAACTGCGAAAA TCACCAATCGCATACAGCGGCTGGCCGACCTGCAAGCGTTCTTCGGTGTAGCGATAGTGTTTACCAATACTGAGAAAACCAAGCATGCCGTTCTTTCTCG
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| Amino Acid Sequence |
>diguanylate cyclase
MKLELKNRLSLRLLRVVLLSALIVGVVLSCAQIVFDAYKTKQSVANDAHRILGMFRDPSTQAVYSLDREMGMQVIEGLFQHESVQMASIGHPNEPMLAER ERPPAEIATRWLTDPILGKAQKYSTQLVGKGPYSEYYGDLNITLDTAAYGENFITNSVIIFISGVLRALAMGLVLYLVYHWLLTKPLAKIIEHLSDINPD RPSAHKLPMIKGNEHNELGVWVNTANQLLESIERNTSLRHEAENSLQRMAQYDFLTGLPNRQQLQHQLDQILNDAGRLQRRVAVLCVGLDDFKGVNEQYS YQAGDQLLLALSDRLRGHGGRLGVLARLGGDQFALVQADIEQPYEAAELAQSVLDDISNPFTLDDHLVHLRATIGITLFPEDGDSTEKLLQKAEQTMTLA KSRSRNRYQFYIASVDSEMRRLRELEKDLRIALEGNQLHLVYQPQISYQAKHVVGVEALLRWEHPQLGWIPPDQFIPLAEQNGSIIAIGEWVLDQACRQL RDWHDQGFNHLRMAINLSTVQLHHAELPRMVNNLLQMYRLPARSLELEVTETGLMEDISTAAQHLLSLRRAGALIAIDDFGTGYSSLSYLKSLPLDKIKI DKSFVQDLLEDEDDATIVRAIIQLGKSLGMQVIAEGVETAAQEAYIISEGCHEGQGYFYSKPLPARELTLYLKQARRIHAASDSAAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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