Strain | Pseudomonas sp. S9 Contig3, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GATCATCGAGGCTGGCAAGAAGCATGGCTTGACGCCTTACGGCACTGAAACCATGCATGTGCTGCGTGCCGAGAAGGGGTTCATCATCGTCGGTCAGGAC ACCGATGGTTCGGTCACGCCAGACGATCTCAACATGGGCTGGTGTGTGGGGCGGCCAAAGCCGTTCTCCTGGATTGGCTGGCGCGGCATGAATCGTGAAG ATTGTGTGCGTGAGCAGCGCAAGCAACTGGTTGGCTTGAAACCGCTCAACCCTGACCAGGTACTGCCTGAAGGTGCGCAATTGGTGTTCGACCCGAACCA GTCGATACCGATGACCATGGTTGGCCACGTCACTTCAAGCTACATGAGTGCCGCCTTGGGATATTCCTTTGCGATGGCGGTGGTCAAGGGCGGCCTGCAG CGCATCGGTGAGCGTGTATTCGCGCCGCTGGTCGATGGCAGCGTAATTGAAGCCGAAATCGTCAGCTCCGTGTTTTATGACCCCAAAGGGGATCGCCAGA
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DNA Sequence for Gene |
>PSES9_RS0108235
ATGTCTAACGTCAATGTCTACAAACAGCGCCCGGATGCGGCTCAAGCGGAGTCGCCACTGTTTCATGCCAGCCTGCACGAACTGGTTGGCAAAGGGTCCA GAAACGCCGGTGTGAACCTGCGCGAGAAGAAATTGTTGGGGCACCTGACCCTGCGCGGCGATGCCAGTGACCCGACGTTTGCCAGTGGCGTGCACAGTGC ATTGGGCATGGAACTGCCGGTCGCACTGACCCTGACGAGCAGCGGCGATACCTCGTTGCAATGGATGTCGCCAGACGAGTGGCTGCTGATCGTGCCCAGT GGCGAAGAGTTCGCCGTTGAGCAAAAGCTGCGCGAGGCGCTGGCCGGTCAGCATATCTCGATCGTCAATGTCAGTGGCGGCCAAACACTGCTGGAGCTGA GCGGTAGCAAGGTGCGTGAGGTCTTGATGAAGTCGACCTCCTACGACGTACACCCGAGCAACTTCCCGGTCGGCAAGGCGGTGGCAACTCATTTTGCCAA GGCGCAACTGGTGATTCGCCACACGGGCGAACACACCTGGGAGCTGGTGATCCGGCGCAGCTTCTCCGACTACTTTTGGTTGTGGCTGCAGGATGCCAGC GCCGAATTTGGGCTCAACATCAGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCATGTTTATCGAAGCTTGGCGCAGTTGCCTGAGGCTGCGCTGATGCCGCGTGTGAATGCAGGGAGATTGTAATGAGCAGAACCCCGGATACCTGGATTT TGACAGCGCAATGCCCAAGCGTGCTGGGCACGGTGGATGCGTTGACACGGTTCCTGTTCGAGCAGCGCTGCTATGTCACCGAACATCACTCCTTTGATGA TCGGTTGTCGTCGCGGTTCTTTATTCGCATTGAGTTTCGCCAGCCGGACGACTTTGACGAGCAGGCTTTTCGTGATGAGCTGGATCAGCGCAGTGCCATG TTCGAGATGCAAACCGAGCTGACCCCGCCGGGCTACCGTGCCAAGGTGGTGCTGATGGTTTCCAAGTCGGATCACTGCTTGAATGACTTGCTCTATCGCC AACGCATTGGCCATTTGCCCATGGACGTGGTCGCGGTGATTTCCAATCATCCGGACCTGGAGCCGCTGGCGCGTTGGCATGCGATTCCCTATTACCACTT
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Amino Acid Sequence |
>sarcosine oxidase subunit gamma
MSNVNVYKQRPDAAQAESPLFHASLHELVGKGSRNAGVNLREKKLLGHLTLRGDASDPTFASGVHSALGMELPVALTLTSSGDTSLQWMSPDEWLLIVPS GEEFAVEQKLREALAGQHISIVNVSGGQTLLELSGSKVREVLMKSTSYDVHPSNFPVGKAVATHFAKAQLVIRHTGEHTWELVIRRSFSDYFWLWLQDAS AEFGLNISQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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