Pseudomonas sp. S9, PSES9_RS0108025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGATCTTTGTGTTCCTGTGCCTGGCCGCACTGTATGAAAGCTGGACCATTCCGCTGGCGGTCTTGCTCGTGGTGCCGCTGGGCATCGTCGGTGCGCTGC TGGCGACCAGCATGCGCGGACTGTCCAATGACGTGTTCTTCCAGGTTGGCCTGCTCACAACCATTGGCCTGGTGGCAAAGAACGCCATTTTGATCATCGA GTTCGCCAAAGAACTCAACGACCAGGGCAAGGGCCTTGTCGAGGCCACGCTGCAAGCCTGTCGCATGCGTTTGCGGCCGATCATCATGACCTCGCTGGCC TTTATCCTCGGCGTGGTGCCACTGGCCATATCCAGCGGTGCAGGCGCGGGCAGCCAGCATGCAATAGGCACAGGCGTTATCGGCGGCATGCTTAGTGCCA CCCTGCTGGCCATCTTCTGGGTGCCATTATTCTTTGTCCTGGTCAGTTCCTGGTTTAAACCCAAAAGGCGTGCAAGGACTGCGCAGGATGAGGTGCGGCC
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| DNA Sequence for Gene |
>PSES9_RS0108025
ATGAATAAATTTACCCTGAGCCTGCTCAGCCTCGCCCTGCTCAGCGGCTGCTCGATGAACCCGGAATACAGCCAGCCGGAGTCACCGGTTACTGCAGTTT ACCCAAGTGCCGGTGCTTACCCCGCCCAGGGCACTACCGAAGCGGCGCAACTGCAGGAATGGCGCAGTTTTTTCAAGGACCCTGCGCTGATCAAGCTGAT CGAGCAATCACTTAACAACAACCGCGACCTGCGTGTTGCGGCCTTGAATGTAGAGGCGTATCAGGCGCAATACCGCATCCAGCGGGCCGAACTCTTTCCC GAGGTAAACGCCAATGGCACGGGCACCCGCCAGCGCATACCGGAAGGCGTCAACCAGAGCAGCGACTCAAGCATCAACAGCCAATACAGCGCCACCTTGG GTGTCAGTGCCTGGGAGCTGGATTTCTTTGGCCGCCTGCGCAGCCTTAACCAGGCGGCGCTGGAGCAGTACTTCGCGACTATCGAGGCGCAACAAAGCGT GCGCATCAGCCTGATCGCCAGCGTTGCCAATGCCTGGTTTACCTTGCAAGCCGACCGACAACTGCTGGAACTCACAGAGCAGACGGTCAAGACCTACCAG GACAGCTATGACCTGACCAAGCGCAGCCTGGAAGCAGGGGCTGTTTCGGCGATTGTTCTGAGCCAGGCGAAAACCTCACTCGATAGCGCCAAGGTGGTAT TGGCCCAGTATCGTCGGCAAGTGGCACAAGACCAGAATGCACTGGTGCTATTGCTCGGCAGCAACCTGCCGCAAAACCTGCCAGCCAGTCCGCAGCTGAG CGACACGTTGCTCACGGAAGTACCGGCCGGCCTGCCCTCGCAACTGCTGCAACGTCGCCCGGATATTCTTCAGGCAGAACACCGGCTCAAAGCCGCCAAC GCCAATATTGGCGCTGCCCGCGCGGCCTTCTTCCCCAGCATCAGCCTGACCGCCAATGCAGGCACAATGAGCTCGTCACTGTCGGACTTATTCAGTGGTG GCAGCGGCACCTGGCTGTTCCAGCCAGAAATCAACCTGCCGATTTTCAACGCCGGACGCCTGAGGGCATCACTGGACGTGGCTGAAATCGAGAAAAACAG CCAGGTCGCGCAATACGAAAAAGCCATTCAACTGGCCTTTCAAGAAGTCTCGGATGGCTTAACCGCGCGCCTGACCTACAAAGAGCAGCTCGCAGCGCAA CAGGCATTACTCGACAGCACCCAGCAGTACTTCGATTTGGCGCAGCAGCGCTACCATGGCGGGGTCGACAGCTACCTGATCTTCCTTGATGCCCAGCGCT TGCTGTTCCAGGTGCGCCAGGACTTGATCAGCGACCGCCTCGCCCAGCTCAGCAGCGAAGTGAACCTGTACAAAGCCCTGGGTGGAGGCTGGCAACCGGG AAGCGAGCTCGCCGACGGATCAGAACCCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCGGGCTTGCCCTTACTGCGCCAGTGCGAACACCTCGGCCAGGTGCGCCGCATAGCGTTTGCGATCCTGTTCGATTGCCGGGGCCTTCATCACATCGTT ACAGATGAAGGTCGGCAGGCCACTCATACCCAGAAACTGGTTGGCCTTGTGAAACGGCAGGTACACCGCATCAACGCCTTTGCCAGCGAAGAAGTCAGAC GGGTCATCAAAGGCCTGGGTTGGCGCATTCCAGGTCAATGAAAGCATGTACTGCTTGCCCTGCAACAAACCACCGCTTCCGTATTTCTGCGAGCTGTCGG AGCGCGTTCGCCCATCATTGGCGTAGAGGCTGCCATGGCCTGCGGTAAACACTTCGTCTATGTACTTCTTGACAGTCCAGGGCGCGCCCATCCACCAGCC CGGCATTTGATAGATGATCACGTCTGCCCAGAGGAATTTCTCAACCTCCTGCTGAATATCGTAGCCCTCATCGATACGGGTTGTTTTCAGCTCAAGACCT
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| Amino Acid Sequence |
>multidrug transporter
MNKFTLSLLSLALLSGCSMNPEYSQPESPVTAVYPSAGAYPAQGTTEAAQLQEWRSFFKDPALIKLIEQSLNNNRDLRVAALNVEAYQAQYRIQRAELFP EVNANGTGTRQRIPEGVNQSSDSSINSQYSATLGVSAWELDFFGRLRSLNQAALEQYFATIEAQQSVRISLIASVANAWFTLQADRQLLELTEQTVKTYQ DSYDLTKRSLEAGAVSAIVLSQAKTSLDSAKVVLAQYRRQVAQDQNALVLLLGSNLPQNLPASPQLSDTLLTEVPAGLPSQLLQRRPDILQAEHRLKAAN ANIGAARAAFFPSISLTANAGTMSSSLSDLFSGGSGTWLFQPEINLPIFNAGRLRASLDVAEIEKNSQVAQYEKAIQLAFQEVSDGLTARLTYKEQLAAQ QALLDSTQQYFDLAQQRYHGGVDSYLIFLDAQRLLFQVRQDLISDRLAQLSSEVNLYKALGGGWQPGSELADGSEP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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