Pseudomonas sp. S9, PSES9_RS0107625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig3, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTTGGAAGGAATCGTCCGGAACACAGCGCCAGCACCGCGATTCTGGTTGAAGGCGTTAACCCGGAAACGCGCGACACCCGGCACTTCGAACGAGAAGT CGGTTTCCAGGAACTCTTCGAAGTCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATAAGCGCATGCACCTGCTTATGGTCCAGCGCAGGCAAGTTGAT GCGACGTACATCGCCATCAACACGAATCATCGGTGGCAGCCCCGAAGAAAGGTGCAAGTCCGAAGCCCCTTGCTTGGCACTGAACGCCAGCAGTTCTGTG ATATCCATGTAACTCCCCAACAGGCTGCTTAAATAACGCTGCACCCGGTTATGCAGTGTTTAAATCAAATCAAACGGCTCAACCAGCACGCGTCGTTGCA GGCAGAATGACGCGCCCTGTCACGTTAGTTTTTCTCAACCAGCGGCCATTGACGTTAGAATGCCCCACACGCAGAGCGAACGGGCCACAGAGCGTAAGTA
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| DNA Sequence for Gene |
>PSES9_RS0107625
ATGTCCACGATAGCAGAGAATATTGCAAAGGTCGGAACTCGGATCCGTGAGGCGGCGCAAGCCTGCGCACGTCAACCAGAGACAATTGGTTTGCTTGCAG TAAGCAAAACAAAACCAGCCAGCGCCGTTCGCCAGGCTTATGCCGCTGGTGTACATGACTTTGGTGAAAATTATCTACAAGAAGCGCTGGATAAACAGCA CGAATTATCCGATTTGCCATTGATTTGGCATTTCATCGGCCCCATTCAGTCAAACAAGACCCGCGCCATCGCTGAAAACTTTGACTGGGTACATTCAGTC GACCGACTCAAGGTGGCACAACGATTATCGGCACAGCGCCCTGCGCACTTGCCCGCACTGAATATCTGCTTGCAGGTCAACGTCAGCCAGGAAGCCAGTA AATCCGGCTGCAGCCCTGAGCAATTACCGGCCCTGGCTGCGGCCGTGAAGGGGTTACCGAATTTGCAGCTAAGGGGACTGATGGCAATTCCAGAGCCAAG CGACGACCCGGCACAACAAAGCGCGGCATTTGCCTTGTTGCGCGAGCTGCAAGAAAGCCTGAATCTCGATCTCGACACATTGTCCATGGGCATGAGTCAC GACCTTGAGGCGGCTATTGCCCAAGGCGCGACTTGGGTTCGAATTGGCACGGCGCTCTTTGGTGCCCGTGACTATCGTTCTGAATCAACACAGGAAACTT CGCTATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTTCTCCTCGCATCGCCTTTATCGGCGCAGGCAACATGGCCGCCAGCCTTATTGGCGGCATGCGCGCGCAAGGCTTCGACGCCAGCGCCATCCGAGCCAG TGACCGCGGTGAAGAGCAACGCGCGAAAATTTCTGCCGAACACGGCATCAGCACTTTTGCCAGCAACGCCGAGGCCATTGAAGGTGCGGACGTCATAGTG CTGTCGATCAAACCGCAGGTGATGAAGGAAGTCTGCACAGACCTTGCCCAGCACCTGCAAGCGGGCCAACTGGTGGTTTCCATCGCCGCCGGCATCAACT GCACCAGCCTTGAAAGCTGGCTCGGCGAGCGCCCCATAGTGCGCTGCATGCCCAACACCCCGGCGCTACTGCGCCAGGGCGTCAGCGGCTTGTATGCCAA TGCTCGCGTGAGCCCTGAGCAGAAAGACCAGGCCGAACAATTGCTGAAAGCCGTCGGCATGACCGTTTGGCTCGACCAGGAACAGCAAATCGATGCGGTA
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| Amino Acid Sequence |
>hypothetical protein
MSTIAENIAKVGTRIREAAQACARQPETIGLLAVSKTKPASAVRQAYAAGVHDFGENYLQEALDKQHELSDLPLIWHFIGPIQSNKTRAIAENFDWVHSV DRLKVAQRLSAQRPAHLPALNICLQVNVSQEASKSGCSPEQLPALAAAVKGLPNLQLRGLMAIPEPSDDPAQQSAAFALLRELQESLNLDLDTLSMGMSH DLEAAIAQGATWVRIGTALFGARDYRSESTQETSL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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