Pseudomonas sp. S9, PSES9_RS0105455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGGACAATCCCCAGGCAAACACTGGGGCAAATTGCTGATACAAAATTGAAACCGCGTCTCAAGCATTGAAATTCCAAGAAAAAATGCTTGTGAGGCCC GCAAAGACTAGCTATAACATGGCCCAAGATCACCCAGCCGCCATCAAGAGCGGACGCAAAGATCAAGGAAATTAAGAAAGATAGCGTTTTGAGCACGACT TTTGCTTTCTGCTACGGCAATGCTCGGAATGCGGCGTAGCAAGCCCGCAATCAGGGCTTTATAAGTGAACAATTACAAGATCCGTTGGCGTAACTCATGC ACCAGTAAAATCTATGAAATTGCGACATGTTCAATCAGTATTTGCGACATCACTGAAAAGAACCAGCAACGAGCAGACGGCAACTATCGCCAATATTGGC TGCGTGTTATAAGTTACCGCCGACACAAAAAGAAAGAGCCGTCCATACAATAATTAATTGGGCAGCACAACTCTTCTAAAAAACCAAAGGAGCAGTCACG
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| DNA Sequence for Gene |
>PSES9_RS0105455
ATGCAAGTGATGAAGTGGAGCGTAATGGCCCTGGCAGTAGCCGCGGGTAGCACTCAAATGGCTTTCGCCTCTAGCCAATCCGAATCTAACGGCTTTCTTG AAGATAGCAGCTTCGACATCTTCAACCGTGTTCTGTACATGAACCGTGATTTCCGTAATGGCCCTAACCCATCAGCTCCTAAAGGTGACAGCGGTTACCG CGAGGAAACTGGCTGGGGTCTGCGCACCCTGTTTGAATCGGGCTTCACCCAAGGCACCATCGGTGTTGGTTTTGACGCTTTCACCCTGAGCAGCCTGAAG CTGGACGGCGGTAGCGGTCACGGTGGTAGCGGTCTGTTTTCACGAGACAGCGACAGCAACTATGAGAAAACCCAATCTCAAGCTGGCGGCGCTATCAAAT TCCGCGTATCCAACACTGGCCTGAAATACGGTGACATGTTTGTTGCCAGCCCAGTATTCAGCACTGACGACAGCCGTATCCTGCCTGAATCTGCAACCGG TACCTACCTGGTCAGCAACGAAATCGAAGGCCTGGAACTGAGCGCTGGTCGCTTCACCGCAATGAGCAGCCAGGTTGCAACCGGTCGCGACACCATTGAC GGTACTGGCTTGAAGTCAGCCAACATCTACGGTGCAAACTACAGCTTCACTGATAACCTCAGCGCTGGCCTGCACTACTCCGACGTTGAAGACTACTTCA AAAAGACCTACCTGAACGTCAACTGGAATCTGCCGATCGCTGAAGATCAAAGCTTGAACTTTGACCTCAACGGTTACCACACCAAAGGTGATGGCGACGA AATCTACGGCGAAGTTGACAACGATATCTGGAGCTTGGCGGGCGCTTACAACATCGGCGCGCACACCTTCACCCTGGCCTATCAAAGCTCTAGCGGTGAT GCTGGCTACGTCTACGGTGTAGACGGCGGCGGCACCATCTATCTGGCGAACTCGGTTCAATACTCCGACTTCAACGGCAAAGACGAAGATTCTTGGCAGG CACGTTACGACATCAACATGGCTAGCTACGGCGTACCAGGTCTGAGCTTTATGACCCGCTACATCGCTGGCGACAACATTGATGTTGGCACTGGCACCGA CGCTCAAGAGCGTGAAATCGACATCGAAGCCAAGTATGTAATTCAAGATGGCGCTGCGAAAGACCTGTCTTTCCGTGTACGTAACGCCTTCTACCGTTCC AGCAATGCATACGGCGGCGATATCAACGATTTCCGTCTGATCATGGACTACCCGCTGGACGTGCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCTCGGTTAGTTTGCAAGCGTTATAAAAAACCCGGCTTCGGCCGGGTTTTTTATTATGTAATGCTGCATCGCCTGGCGATATATAAACAGCACCATGGT CTTAAATAGGCAGCGCATAAGTTCCCGTCACATGGGCGACCAGCTCATCTTCATTGCCCGCCGAATACAATGCGACTTCACACACCGCCTGGCGCCGACT TAAACGCAATATTTTTGCCTGCGCCAATAAGTCGACCGCTTTTGGTTTGACCAGAAAGTTGATATTCAAGTTGGAGGTCACTGCCATCTCCACTCGACCC AGCCGACCCAACACCACCGCATACATCGCCGCATCCGCCAACGCCATGATAGTCGGCCCCGAAATAGTGCCGCCGGGGCGCACCAATCTTGCGCAGAAAG GTATACGCGCCAAGGCGCCTTCAGAATCAAGCCGATCGATGGTCAGTTGCATCTCTTGCGCTTGCGGTAATCCAGACCAGATAAGCGCTTGTACTTGCTC
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| Amino Acid Sequence |
>membrane protein
MQVMKWSVMALAVAAGSTQMAFASSQSESNGFLEDSSFDIFNRVLYMNRDFRNGPNPSAPKGDSGYREETGWGLRTLFESGFTQGTIGVGFDAFTLSSLK LDGGSGHGGSGLFSRDSDSNYEKTQSQAGGAIKFRVSNTGLKYGDMFVASPVFSTDDSRILPESATGTYLVSNEIEGLELSAGRFTAMSSQVATGRDTID GTGLKSANIYGANYSFTDNLSAGLHYSDVEDYFKKTYLNVNWNLPIAEDQSLNFDLNGYHTKGDGDEIYGEVDNDIWSLAGAYNIGAHTFTLAYQSSSGD AGYVYGVDGGGTIYLANSVQYSDFNGKDEDSWQARYDINMASYGVPGLSFMTRYIAGDNIDVGTGTDAQEREIDIEAKYVIQDGAAKDLSFRVRNAFYRS SNAYGGDINDFRLIMDYPLDVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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