Strain | Pseudomonas sp. S9 Contig2, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATGCGCGTGGTCGGGGGCGAAGCCGTGATGGCTCCGGGGCTTGCCAGCCTGCCGGACGGCGCCACGGGTGACTGGTTTGCTGCAGGGACAGGCTGGGGCA CGTTTGCCGAGCGCATTGCAATCAAGCCAAGTGCCCAGGCTCCATCGATGTTACCCCATGCCCAAGACTTGCTGGCGCTGGCCCAGTTCGCCTGGGCGCG GGGCGAGTCGCTGGTTGCAGATGACGCGCAACCGGTGTACCTGCGTGACCAGGTGGCAACGCCAAAAGCATCGAGCTAATGAGTCGGCCGGCTTTTATGT TCGTACACTGGCCTGTCGCTTGGATATGGCCGTTTGAGCAGAAAAGCTCGCGGCTGGTCACTTGTGGATTGCCAAGTGCTTTACACAGGTTTAGATTGCA GCTGCAAGCACCGTAGTTACTGATGATCAGGTTGTTGAGGAGCCTTCTGGGCCACCCCAGCAATACCCGGCGCAGTGGCTTCTCAGAGGTTTCATAGTTA
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DNA Sequence for Gene |
>PSES9_RS0105170
ATGCGTATAGACGGCTCCATAGTCCCATACTCGCCAGATCGTGGCCCTCGCTCGGGGACTGCGGTCACCCCGTATCGCGAAGCCCAGCGCGAGGCTGAGA CGCGTCGTGAACAACCGACGGCAGTGGGTGCGAGCCAAGGTTTTGAAACTGCACCGCAGATTCGTCGGGTGCAAGCTTCCAGCGAGAGCGCGCCGAGTCG TACCAGTCAGGCGCAGGACCTGGTCTACCAACAGCCGGCGATCAGCAGTCGCGCCTCGCAAGCGATTGCCAGTTACAGCACCACCGCACAATTCATTACC GAATCCGATGCGCAGCAGGTGCTGGGTCTCGATCTCTACGCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGTTACCGTATTTTCTTGGCTGCCCATCATGGAGCGAGGCCGCCTGGCGCGGCTCGATCTATGCCCAAGGCACGCGTCCGACTGATTTCCTCAAGCACTA CTGCCAGCTGTTCAATGCAGTCGAAGGCAACACCACCTTTTACGCGCGCCCAGCGGTTGAAACCATCAGCAAATGGTCCGAGGCAATGCCTGAGCACTTC CGCTTTTGCGCGAAATTGCCACGGGATATCAGCCATTGCGATGACCTGCGCGAGCAGTTGCAGGCGCTGGATGATTTTCGCGCACTGCTGGCCCCCCTGG GCGCACGGGTGGCGCCGTACTGGTTGCAATTGCCTGCAAGCTTTGGCCCACAACGTTTGGCTGAACTGGCGCTGTTGATCGAGCACTGGGGCACAGGTTC AGGCCATTTTGGCGGTCGGGCCCTGGCCATTGAAGTGCGTCACCCTGAGTTTTTTGCCAAGGGTGAAGCGGAGCGTGCGCTTAATCGCCTATTGCTTGAT
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Amino Acid Sequence |
>hypothetical protein
MRIDGSIVPYSPDRGPRSGTAVTPYREAQREAETRREQPTAVGASQGFETAPQIRRVQASSESAPSRTSQAQDLVYQQPAISSRASQAIASYSTTAQFIT ESDAQQVLGLDLYA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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