Pseudomonas sp. S9, PSES9_RS0105105
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCCAAAAGTATGGCGCAATGGCTGGCCACAGAGTCAAAACTGCCTGTGCGTCTGGCGCAGCCCGATGATCAGCCTCGCCGTGGCGAGATTTTGCTGGCG GGTACCAACAACCACCTGTGCATGCAAGCCAATGGTCGCCTGTGCTATCGCAAGGAGCCTGCCGAGCAGATCTACCGGCCCTCCATAGATGTGTTCTTTG ACAGCCTGGTGCGCCATTGGCAAGGCGAGGCGGTTGGGGTCTTGTTGACGGGGATGGGGCGTGACGGCGCCCAGGGTTTGAAAAACATGCGTGAGCGGGG CTTCTTGACGATCGCCCAGGACCAGGCCACTTGCGCGGTGTACGGCATGCCCAAGGCTGCTGCCTCTATCAATGCGGCGGTAGAGATTCTGCCTCTGGAT CAAATTGCATCAAAATTGATTGAACACTACGGGTAACGGTTTGGCTGCTGGCTGAGTTGAGTAGATAAAGGCACAATGCCCTGTGTTGTCTGGAGATGGT
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| DNA Sequence for Gene |
>PSES9_RS0105105
ATGCACGATTCCAAGCTAATAGATGCCAAAGACTATCCTGCAGCGACCAACGCTGTGATGGTGTTGCTGGTCGACGACAAAGCCATGATTGGCGAGGCAG TGCGTCGTGCACTGAGCGGCGTGGAGGGCATTGATTTTCACTTTTGCTCCGATCCCTACTCGGCCGTGGATACTGCCCGGCAAATCAGGCCAACGGTGAT TCTGCAAGACCTGGTCATGCCGGGGGTTGATGGTTTGAGCTTGTTGGGTGCATATCGAGCAGAGCCAAGCCTGCAGGACATTCCCATTATCGTGCTTTCG ACCAAGGAAGATCCCCAGGTCAAAAGCGCCGCCTTTGCCAGCGGCGCCAACGACTACCTGGTGAAACTGCCCGACACCATTGAATTGATCGCGCGTATTC GCTATCACTCGCGTTCCTATATTGCCTTGCAGCAGCGGGACGAGGCGTTTCGAGCCTTGCGTGAGAGTCAGCAACAGCTGCTTGAAGCCAATCTGGTGCT GCAGCGCATGATGAAATCCGATGGCCTGACCGGTTTGGCCAATCGCCGGCATTTCGACGAGTACCTTGAGATCGAGTGGAGCCGGGCGCTTCGCGAGCAA AGTCAATTGTCCTTGATCATGATCGATGTCGACTATTTCAAGGTCTATAACGATCAGTTTGGCCATGTGGCTGGCGATGACGTGCTGCGCCGGGTGGGTG CTGCGCTAGCCGACGCATGTTCGCGCTCCTCCGATCTGGTCGCCCGTTACGGCGGCGAAGAGTTTGCGATGATTCTGCCAAGCACGGCGTCCGGTGGCGC GCGCTTGCAGGCCGAAAAGGTCCGCCGTGCTGTCGAGGCCCTGAATATTCCGCACTGCCAGCCTCAGGAAGGGGCGTCAGTGACCGTGAGCCTTGGCGTC GCAACCATCATGCCTATCGCCGGGGGCGATTCATTGACCCTGGTCGAAAAGGCCGACAACGCGCTATATCGGGCCAAAGGTAACGGTCGTAACCAGGTTG GCGTCGAGCAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTGGACAAACACCGGGCTGTCGATGGCGCGCTACAGCAGGTATAATCGTCGGCTTTTCGAACGTTTTACCTGCGAGTGCCCGCCAGCTATGGAAATCA ACCCGATCGTTAACAGCATCAAGGACCTCTCCGAGCGCACCCTGACAATTCGGGGGTATCTTTGACTACGATCAAAAGCATGATCGTCTAGTCGAAGTAA ACCGTGAGCTTGAAGACCCAAATGTCTGGAATGACCCTGAGTACGCCCAGAACTTGGGGCGCGAACGCGCATCCCTTGCATTAATAGTCGAGACCCTGGA CGACCTTCAGACAGGCTTGGCCGACTGTGCCGACTTGCTCGAAATGGCCGCTGAAGAAGACGATCAGGGCGCAGTTGATGATGTAGCGACCGAAGTTGAA CGCCTGCGTGAAATTCTTGAGAAGCTTGAGTTCCGCCGCATGTTCAGCGGTGAAATGGACCCTAATAACGCTTATCTGGATATCCAGGCGGGCTCTGGCG
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| Amino Acid Sequence |
>diguanylate cyclase
MHDSKLIDAKDYPAATNAVMVLLVDDKAMIGEAVRRALSGVEGIDFHFCSDPYSAVDTARQIRPTVILQDLVMPGVDGLSLLGAYRAEPSLQDIPIIVLS TKEDPQVKSAAFASGANDYLVKLPDTIELIARIRYHSRSYIALQQRDEAFRALRESQQQLLEANLVLQRMMKSDGLTGLANRRHFDEYLEIEWSRALREQ SQLSLIMIDVDYFKVYNDQFGHVAGDDVLRRVGAALADACSRSSDLVARYGGEEFAMILPSTASGGARLQAEKVRRAVEALNIPHCQPQEGASVTVSLGV ATIMPIAGGDSLTLVEKADNALYRAKGNGRNQVGVEQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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