Pseudomonas sp. S9, PSES9_RS0104660 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. S9 Contig2, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTATCGCGAGTTGGCCCGGGCGGTTCATCCGGATCGCTTTGCCGACGCCGATGCGCGTGAGCAGCGCGTTGCGCTGGAGAAGTCCGCGAGCCTCAATG AAGCGTACCAGACGCTGAAAAATGCTCCGCAGCGTGCCCGTTACTTGTTGGCCCTCAGTGGCCCCGAGCTACCGCTTGAAGTAACAGTGCATGACCCCGA CTTCCTGATGCAGCAGATCCAGTTGCGCGAAGAGCTTGAAGAGCTGCAGGACGCCGCTGATATTGAGGGTGTGTTGCAATTCAAGCGCCAGCTGAAAGTT GCCTCTGATGAGTTGAACGAAAGCTTTGCGGTTTGTTGGGATGATCCTGCCCGTCGTGATGAGGCCGAGCGTCTCATGCGTCGCATGCAGTTTCTCGACA AGCTTTCCCACGAGGTCCGCCAGTTGGAAGAGCGCCTCGACGATTAACGCTCGCGTGCCTCAAGGGGTGCGCTTGATATTCACAAAAGCATATATAAACC
DNA Sequence for Gene
>PSES9_RS0104660 |hscA
ATGGCCTTACTGCAGATCGCTGAGCCCGGACAGAGCCCCCAGCCACACCAGCGTCGGCTGGCAGTCGGGATCGACCTGGGCACCACCAATTCGCTAGTCG CTGCCGTTCGCAGCGGAATTTCCGAGCCGTTGGCTGACGCTGAAGGCGAAGTCATACTGCCGTCCGCCGTGCGCTATCACGCGGACCGGGTGGAAGTCGG TGAGTCTGCCAAAGGCGCAGCCTCTAGCGACCCGTTCAACACCATCGTTTCGGTCAAGCGCCTCATGGGGCGCGGTCTTGCGGACGTCAAGCAGCTTGGC GACCAGTTGCCTTACCGCTTTGTTGGCGGTGAGTCGCAGATGCCCTCGATCGAAACAGTGCAGGGCGCCAAGAGCCCGGTTGAAGTTTCCGCCGAGATTC TCAAGGTGTTGCGCCAGCGTGCCGAGTTGACCCTTGGTGGTGAGTTGGTGGGTGCCGTTATTACCGTGCCTGCGTATTTCGATGAAGCGCAGCGCCAGGC CACCAAGGATGCGGCGCGTGTAGCGGGCTTGAATGTCCTGCGCTTGCTCAATGAGCCTACCGCGGCTGCCGTCGCTTATGGGCTCGACCAGCAAGCTGAA GGCGTCGTGGCAATTTATGACTTGGGTGGCGGCACCTTTGATATTTCGATCCTGCGCCTGACCAGCGGTGTATTTGAAGTCATGGCGACTGGCGGAGACA GTGCGCTGGGTGGCGATGACTTTGATCATGCGATCGCCAGCTGGATTATCGAGCAGGCGGGGCTCTCGGCTGATATCGATCCGAGCGCCCAGCGCAGCCT GCTGGAGGTAGCCTGTGCTGCCAAGGAAGCCCTGACCAGCAATGATGTCGTCGAGGTGGTTTACCAGCAATGGCGCGGTGAACTGAGTCGCGCGCAGTTT GAGGCGCTGATCGAGCCGATGGTTGCCCGCAGCCTCAAGGCCTGTCGCCGTGCAGTGCGTGATTCAGGCATCGAGCTAGAGGAAGTTGGCGCCGTGGTCA TGGTTGGTGGTTCTACGCGAGTGCCGCGTGTGCGCCAGGCCGTTGCCGAGATGTTTGCCCGTCAGCCCCTGACCGATATCGATCCTGATCAGGTTGTTGC CATCGGCGCGGCGATTCAGGCAGATACCCTGGCCGGGAATAAGCGGGGCGATGGTGAAGAGCTGTTGCTGCTGGATGTCATTCCCTTGTCACTCGGTCTG GAGACCATGGGTGGGTTGATGGAGAAGGTCATTCCGCGTAACACCACCATACCTGTTGCCCGTGCCCAGGACTTCACCACCTACAAAGATGGCCAGACCG CCATGATGGTGCATGTGCTCCAGGGTGAGCGCGAGTTAATCAGTGATTGCCGCTCCCTGGCGCGTTTCGAACTACGTGGTATCCCGCCAATGGTGGCGGG TGCAGCGAAGATCCGGGTGACATTTCAGGTTGATGCCGATGGCCTGTTAAGTGTGGCTGCGCGCGAACTGGGTTCGGGCGTAGAGGCCAGCATTCAGGTT AAGCCGTCCTATGGGCTGACTGATGACCAGGTAGCCAAAATGCTGCAGGACTCATTCAGCAATGCCGGGGGCGACAAGCAGGCGCGCGTATTGCGTGAGC AGCAAGTTGATGCCCAGCGCTTGCTTGAAGCAGTTGAAGCAGCGCTGGATGCCGATGGCGAGCGTTTGCTGGATCGCGATGAGCGGTTGGCGATTGACGC CCAGGTGGAACTGTTGCGCGAGTTGATAAATGGTTCCGATGGCTTGGCCCTTGAACAGCAAACCAAGCGATTGACCCAAGTAACCGATGCGTTTGCAGCG CGTCGCCTGGATTCAACGGTCAAAGCCGCGCTGGCTGGCCGTAGTCTTAATGAGATCGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCATGACCCAGTTGATTTTCCTGCCGCATGCCGAGCATTGCCCAGAAGGTGCGGTTTTCGAGGCTCAGCCTGGTGAGACTGTGTTGAATGCTGCGCTGCG CAATGGCATCCATATCGAGCACGCCTGCGAGAAGTCTTGTGCGTGCACCACATGCCACGTCGTGGTCCGTGAAGGTTTCGACTCCCTCGAGCCTTCCGAC GAACTGGAAGATGACATGCTCGACAAGGCCTGGGGTTTGGAGCCTAATTCGCGCCTGTCTTGCCAGGTAGTGGTGGGCGAAGAGGATATGGTGATCGAAA TCCCGAAATACACCATTAATCAGGTTTCTGAAGGCCATTAAGGAGCATCACCATGAGCATCAAATGGTCCGATGTACTGGAAATTGCCATTCAGTTGTCA GAGAGCAAGCCGGATGTCGATCCACGTTACGTGAACTTCGTCGATCTGCATCGTTGGGTGATCGAACTGCCGGAATTTTCCGACGATAGTCAGCGCGGCG
Amino Acid Sequence
>chaperone protein HscA
MALLQIAEPGQSPQPHQRRLAVGIDLGTTNSLVAAVRSGISEPLADAEGEVILPSAVRYHADRVEVGESAKGAASSDPFNTIVSVKRLMGRGLADVKQLG DQLPYRFVGGESQMPSIETVQGAKSPVEVSAEILKVLRQRAELTLGGELVGAVITVPAYFDEAQRQATKDAARVAGLNVLRLLNEPTAAAVAYGLDQQAE GVVAIYDLGGGTFDISILRLTSGVFEVMATGGDSALGGDDFDHAIASWIIEQAGLSADIDPSAQRSLLEVACAAKEALTSNDVVEVVYQQWRGELSRAQF EALIEPMVARSLKACRRAVRDSGIELEEVGAVVMVGGSTRVPRVRQAVAEMFARQPLTDIDPDQVVAIGAAIQADTLAGNKRGDGEELLLLDVIPLSLGL ETMGGLMEKVIPRNTTIPVARAQDFTTYKDGQTAMMVHVLQGERELISDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLSVAARELGSGVEASIQV KPSYGLTDDQVAKMLQDSFSNAGGDKQARVLREQQVDAQRLLEAVEAALDADGERLLDRDERLAIDAQVELLRELINGSDGLALEQQTKRLTQVTDAFAA RRLDSTVKAALAGRSLNEIEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site