Pseudomonas sp. S9, PSES9_RS0101900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. S9 Contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGATTGCCTCTTACGTCGGCGAAAACGCGCTCTTTGAACAACAGCTGCTCAACGGCGAGCTGGAAGTCGAACTGACGCCACAAGGCACTCTCGCGGAAAA GCTGCGCGCAGGTGGGGCCGGGATTCCAGCGTTCTTCACCGCCACCGGGTACGGCACGCCCGTGGCTGAAGGCAAGGAAGTCCGTCAATACGGCGACCGT CACTACATCCTGGAGCCTTCGATTACCGGTGACTTCGCCATAGTCAAAGGCTGGAAAGCCGATCATTTCGGCAATGTCATCTATCGCCACACGGCACAGA ACTTCAACCCGCTGGCCGCGACTGCAGGACGCATCACAGTGGTCGAGGTTGAAGAAATCGTCGAACCCGGCGAGCTCGATCCGGCGCAGATCCATACCCC CGGCATTTACGTCGACCGCATCATCCAGGGGCACTTCGAAAAGCGCATTGAAAAACGCACCGTACTGGCGTGAGCCACCCATATTAAGGAGAGGCCGCTC
DNA Sequence for Gene
>PSES9_RS0101900
ATGGCACTTACCCGCGAACAAATGGCTCAGCGCGTTGCCCGCGAGCTCAAGGACGGTTACTACGTCAACCTGGGCATTGGCATTCCAACGCTGGTGGCCA ACTATGTACCGGATGATATCCAGGTGATGCTGCAATCGGAGAATGGCCTGCTCGGCATGGGTGCATTCCCCAAAGATGAGCATGTTGATGCCGATATGAT CAACGCCGGCAAACAGACTGTTACCGCAGTAAAGGGCGCATCGATTTTTTCATCGGCCGAATCCTTCGCCATGATCCGTGGCGGCCATGTCGACCTGACC GTGCTCGGTGCTTTCGAGGTGGACGTCGAAGGCAACATTGCCTCCTGGATGATTCCCGGCAAGCTTATCAAAGGCATGGGCGGCGCCATGGACCTGGTTG CAGGGGCCGATAATATTATCGTGACCATGACCCACGCCTCCAAAGACGGCGAATCCAAGCTGCTCAGTCGTTGCACCCTGCCCCTCACAGGCGCGGGTTG CATCAAGAAAGTGCTGACCGACCTGGCCTACCTTGAGATCGAAAACGGTGCATTTATCCTGCGCGAACGAGCGCCCGGAATCAGCGTCGAGGAAATTGCC GAAAAAACAGCTGGCCGCCTGATCATCCCCGACCATGTCCCGGAAATGACCTTCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCCCCTTCCCTCGCCTTGCCATCTCCACCGTCGGTGGCAAGGCTTTTTTATTCATTGCTACTCGCCGCAGCCTTGCCAGGCACGGACCCTTTACGAGGT AACCTCAAATGAATGATGTCGTCATCGTAGCCGCAACGCGCACAGCCATTGGCAGTTTTCAGGGTGCATTGGCAACTGTACCAGCGCCGGAGCTGGGCGC AGCCGTGATTCGCCGCCTGTTGGAACAGACCCGGATTGACGGCGCGCTGGTTGATGAGGTGATCCTCGGCCAGGTACTGACTGCTGGCAGTGGCCAGAAC CCGGCCCGCCAGGCATCGATCATTGCCGGCTTACCCCACGCCGTCCCGGCCATGACCCTGAACAAGGTATGTGGCTCGGGTCTCAAGGCTCTGCATCTTG CTGCCCAAGCCATTCGCTGCGGGGATGCAGAGGTGGTTATCGCCGGCGGCATGGAGAACATGAGCCTGGCGCCTTATGTCATGCAAGGCGCACGAACCGG
Amino Acid Sequence
>succinyl-CoA:3-ketoacid-CoA transferase
MALTREQMAQRVARELKDGYYVNLGIGIPTLVANYVPDDIQVMLQSENGLLGMGAFPKDEHVDADMINAGKQTVTAVKGASIFSSAESFAMIRGGHVDLT VLGAFEVDVEGNIASWMIPGKLIKGMGGAMDLVAGADNIIVTMTHASKDGESKLLSRCTLPLTGAGCIKKVLTDLAYLEIENGAFILRERAPGISVEEIA EKTAGRLIIPDHVPEMTF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site