Pseudomonas sp. S9, PSES9_RS0101460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGATCGTATTGAGATTCGCGGCTTTGGCAGCTTCTCGCTGCATTTTCGCGCTCCACGCGTGGGCCGTAACCCCAAGACGGGTCAGTCCGTCAGCCTCG ACGGCAAGTTTGTCCCGCACTTCAAGCCAGGCAAAGAGCTGCGTGATCGGGTGAACGAGGACGACTAGTCCTGTTCCTGTTTCGGTAGACAAATGGCCTA ATCAATCAATGATTTAGCTGTTTGTTGTAGTAGCAAGCTGCTTATCTAAAACGTTAAACTGCGCACGTTTTTGTCTTTGGCAGGGGCGTTGTACGTAGCA GGGATCTATCGTCAGTAAAAACTCCTGGGTTTACGTCGGGAAATGGAATTTGCGTCAGAAACGGGCGTCTAAGCTAGCTGGACCGCCATTTAACCTTGCA GCCAAGGTATAGCGCATAACGCATGCTATGTAGCAGGAGGTGCAGACCTTCGTGCTCATGATGGGCAATGACAAAAACGGGAGCTTCTGTGAATCAAAGA
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| DNA Sequence for Gene |
>PSES9_RS0101460
ATAACTGCTGAACAATCTCACACCTCTGATGAGATCGATTTAGTTGAGCTGGTTAAACAACTCTGGCTGCAAAAGTGGCTAATTATTGGCTGCACAGTAC TCATTACGGCTCTTGCCGCCGCTTATGCATTTCTCAGCACTCCTACCTACCAAGCCTCCGCAGGGGTAATGCCGCCTCGTCTCAGCGATATTGCCGGTTA CAACCTGGGCCGCAGCGAAGCAAAGCTCAATGAGTTTACCGTTGAAGATGTCTACGGCGTTTACAAGCGCAACTTGCTGTCCGGCTCACTACAGCGCCAG TTCTTCGATGAAGTCTATTTGCCCAGCTTGCCAGCTGAAGATGCAGGCGCTGCAAAAGACAAGTTGTGGGACCGTTTCAACTCTGATTTCAGTGTCCAGG CACCCGATGCCAAAAACAACCCCGACTATTTTGTTGTAAAAGTCGAAGGCAAACAGCCTGAAGTCGTGGCTGAGTGGGCCAACAAGTACGTGAAAATGGC TGCAGACAAGTCTGAGGAGGGCATGCAGACCAACCAACTGACGGAGATTGGTACCAAGGCACAGTCTCTTTCCCGGCAGATGGATGCACTGCGCGCCACC GCTGAAAAAAGACGTGAAGACAGAATTGCACGCCTGCAAGAGGCGCTGATTGTGGCGGATGCCGTAGGCTATGACTCACCACAAGTGACACCAGGAAAAA CCTCCTCGGACGGTGATTTCGCCGAGTTTATGGACGGCAACCTGATGTACATGCGCGGCGCCAAAGCCGTCAAGGCAGAGCTGGCCGTACTGGAAAAACG TACCAACGACGATCCCTTTATCGTTGAGCTGCGTGGCATCGAAAACCAAATGGATTTCCTGCAGAAAATCGACGTGAATCCAGACAATGTGTCTGTATTT ACTTTTGATAGCCCTGCGCTAGTGCCGGAAACACCGATCGCACCAAAGAAAATGCTGATATTGGCGTTGGGTATTATTTTAGGTGTGGTTTTAGGTGTTT TTTTAGTCTTGGTTAGATATGTATTTAAAAGTTGTTTCTCTAAAGACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTATTAAATGCGCGGCTTTTTAGTATAAGCATGTGCGGTGGCTGGTTATTATTTTGATAGCTATGCAGGCTGAATATAAATTGTGTATTGATAGGGAAA GTAATGCGTAGTCTTGATGACGTGAAAATAGCAATTATTGGTCTTGGCTATGTAGGGCTGCCACTTGCTGTCGAGTTCGGTAAAAAGCGTTCAGTTATTG GGTTTGATATCAATGAATCGCGTATTTTTGCACTTAAATCTGGACATGACTCGACGCTAGAAGTTAGTGATCAAGAGCTTGCTGAGGCTAAGCACCTACA ATTTAGTAGCGGTGTAAATTCGTTAGCTGATTGTAACGTCTATATTGTGACCGTCCCGACTCCGATAGATGAACATCGGCAACCCGATTTAACGCCATTG ATTAAAGCATCTGAGACTATAGGTAAAGTCCTATCGAAAGGTGATATCGTAATTTACGAGTCAACTGTATATCCTGGTGCAACAGAGGAAGACTGCGTTC
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| Amino Acid Sequence |
>chain-length determining protein
MTAEQSHTSDEIDLVELVKQLWLQKWLIIGCTVLITALAAAYAFLSTPTYQASAGVMPPRLSDIAGYNLGRSEAKLNEFTVEDVYGVYKRNLLSGSLQRQ FFDEVYLPSLPAEDAGAAKDKLWDRFNSDFSVQAPDAKNNPDYFVVKVEGKQPEVVAEWANKYVKMAADKSEEGMQTNQLTEIGTKAQSLSRQMDALRAT AEKRREDRIARLQEALIVADAVGYDSPQVTPGKTSSDGDFAEFMDGNLMYMRGAKAVKAELAVLEKRTNDDPFIVELRGIENQMDFLQKIDVNPDNVSVF TFDSPALVPETPIAPKKMLILALGIILGVVLGVFLVLVRYVFKSCFSKD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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