Strain | Pseudomonas sp. S9 Contig1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AGAGCTGGGCGATAGCGGCAATGCACCTGCGCGGCCGCATTTCGCCGAATTCATGGTCCGTGCAGGCTTTGTGAAAGATCGCGCCGAAGCTTTTCGCAAA TGGCTTGGCTCCGGCAAGTTGGGCGATGTGAAGCAGCACTGGCCAACGCTTGACGAGGCCGTCGCGACCTTACGGCAGGCCGATGCATTGATTAGTCTGG CGCACCCGTGGCAGTACGACTTTACTCGTAGTAAGCGACGCCGTTTGGTTGCCGCATTTTCAGAAGCAGGTGGGCATGCACTTGAGGTCTGTAATGGCAT GCAGCCACCTGAGCAAGTTGGCGGCTTGGCCATATTGGCCCGTGAGTTTGAGTTGCTGGTCAGTGCCGGCAGTGACTTTCATGCACCGGGCAACTGGTCG GAACTGGGAATGTATCGCCCCGTGCCAGAAGACCTCTTGCCACTATGGACGCGCTTTGAGCATGTTCAACAATCAGCAGTCATACGAGCAGGGAGCTAAT
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DNA Sequence for Gene |
>PSES9_RS0101360
GTGAGTCAATTCTTCCAGGTCCACCCGGAGAACCCACAGTCGCGCCTGATAAAACAGGCTGCGGAAATCATCCGAGGCGGTGGCGTGGCTGTCTATCCGA CCGACTCATCCTATGCCATTGGTTGCCGCCTGGGGGACAAGAACGCCCTGGAGCGAATTCGTCGCTTGCGTCAGCTCGATGACAAGCACAATTTCACCCT GGTCTGCCGGGACCTGTCACAACTGAGTACCTTCGCCAAGGTCGACACCGGGGCTTTTCGTCTGCTCAAGACCCATACGCCGGGGCCCTATACCTTTATC CTCAATGCCACGCGTGAGGTGCCGCGTATCATGCTGCACGCCAAGCGCAGGACTGTTGGCCTGCGGGTGCCGAGCCACCCGATTGCCCAGGCCTTGCTTG AGGAGCTGGGCGAGCCGATCATGAGCGTGAGCCTGATCATGCCGGGTGAGACGCTGCCAATGAGTGATCCCTATGAAATGCGCTCGCTGCTTGAGCATCA TGTGGAGTTGATCATCGATGGCGGCTTCGGTGGCCTGGAAGCCTCTACAGTAATCAATCTGTCTGAAGCAGAGCCCGAGATCGTGCGTGTCGGCTGTGGC GATCCGCAACCCTTCGAGAATCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGCATTGATTGGACTGTGATGCAGGCTGAAGAACCCGTGGTTCGCCAGGCTGTCGTTATGCGCTGTGACTTGGTAATGTCTGTGCAATTGCTTTTAGCGG GAAACCCGGTTTGAACCTTGTAGACTCTGAGCGGCGCGTACTTTCAGGCATGCGTCCAAGCGGCCAGATGCATATTGGCCATTATCACGGCGTATTAAAA AACTGGGTCAAGCTGCAGCACAGCTATGACTGTTTTTTTTGCATCGTCGACTGGCACGCGCTGACCACCGATTATGAAGATGTCAGCCTGCTGTCCAAGC ATGTGCAGGACATGGCGATCGACTGGCTGGCCTGCGGCTTGAGCCCAAGCTCGGCAACCCTGTTTATCCAGTCACAGGTGCCTGAGCATGCGGAGTTGCA TGTGCTGTTGTCGATGCTTTGTCCGCTGAGCTGGCTGGAGCGTGTGCCTTCGTACAAAGAGTCGCAGGAACAACATCAGGGGCGTGACCTGGGAACCTAT
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Amino Acid Sequence |
>translation factor Sua5
MSQFFQVHPENPQSRLIKQAAEIIRGGGVAVYPTDSSYAIGCRLGDKNALERIRRLRQLDDKHNFTLVCRDLSQLSTFAKVDTGAFRLLKTHTPGPYTFI LNATREVPRIMLHAKRRTVGLRVPSHPIAQALLEELGEPIMSVSLIMPGETLPMSDPYEMRSLLEHHVELIIDGGFGGLEASTVINLSEAEPEIVRVGCG DPQPFENP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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