Pseudomonas sp. S9, PSES9_RS0100995
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCTGATTCGCACGTAGCAATTCCCGTGGATGAGCGCAGCCTTGAGCAGATCCGCAGCCAGGACATGCAGCCATTTGCCCAGTTGGGAAATCAGCTGGCC GCGGTGATGCCAGCGCACGTTATCTATCCGAAAGTCGATGATCAGCCTGCCGGTTTCTCACGCCGTTGGTTGCAAGACATCCTGCGTGGCGAACTTGGCT TCGAGGGTGTGATCTTCAGTGATGACCTGTCGATGGCGGGCGCCCATGTAGTTGGCGATGCGGCGTGCCGAATCGAAGCGGCGTTCAATGCCGGTTGCGA CATGGGCCTGGTCTGCAATGATCGAGCAGCAGCCGAGTTGGCCTTGAGTGCCGCGCAGCGCCTCAATGTAGTCGCGCCTGACGGTTTGGGGCGGATGCGT CGCCAGGCATTCCCGGGCATAGAATACCGTCAGAGTCCGCGCTGGCTTGAGGCTATTGGCGCATTGCGCGCTGCACAGTTGGTTGAATAAGGATAACGAG
|
|
| DNA Sequence for Gene |
>PSES9_RS0100995
ATGACTGTCTACGCGATCATTGGTGGCACTGGCCTGACGCAGTTGCAAGGCTTGACCATTACCGCTGCGCTGAATATCGATACGCCCTTTGGTGCACCGT CCGCACCGGTGCTGCGAGGTGAATACGCAGGACGCGAAGTGTTGTTTTTGGCGCGCCATGGTCATCCGCATCGAATTCCACCGCACCAGGTCAATTACCG CGCCAATTTGTGGGCGTTGAAAGAGGCGGGAGCCCAGGCCATTGTTGCGGTCAACGCCGTCGGTGGTATCCATATGGCCATGGGGACCGGGCACTTCTGC GTGCCGCATCAGATCATTGACTACACAAGCGGGCGCGAGCACACCTACTTCGCCGGCGAGCTGGAGCACGTGACCCATATCGACTTCAGTCATCCTTATG ATGAGGCGCTGCGCAGCAAGCTTTGCCAGGCATTGGCTGCCGAGCGCTGTGAATTCAGTAATCATGGGGTTTATGGTGCGACCCAAGGTCCGCGTCTTGA AACCATGGCCGAGATCGCCCGCATGGAGCGCGATGGCTGCGATATTGTTGGCATGACCGGCATGCCGGAAGCAGTATTGGCGCGTGAGTTGACGCTGCCT TATGCCTGTCTGTCGCTGGTGGTTAACCCGGCTGCCGGCAAGAGCAATGAGCTGATTACCATGGCCCAGATCGAGCAGGCGCTGGTCGAGGGGATGGACA AGGTCAAGGCCGTCCTGGCGCGGGTGCTGAGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCGGGTAAAGGGTGGGCGCGCTTGGCGTTGCACACCCTGTCGAGTTGCCTGCCTGGTTAGTGCTAATCAAGCCCTGCGGTATTATCCGACCTAGAACTT TGGCCCGGATTTGGTGTTATTGCCCTTGGCCATGCGGTCGTAGAGCACTACATTCACCGTCGCCGCGAGATTCATGCAGCCTTGAGTGGGGATGTACACC ACATCTTCGCACCAGGCGCGAATTTCCTTGCTGAGCGAGCCGTCTTCCGGGCCAAAGATATAGATCGCGCGGTCAGGATGGGTGTATTCCGGCAAGGCGT GGGCGCCATCAACCAACTCCACGGCCACGGGCGTGCACCCCAGCGGAATGATCTTCTGCAAGTCGTCGATATTGATCAATGGAATATCAAGATGCACGCG CTTGGTGTCGGTGACAAAGTCCTTGGCGCGGTCATAGCGGGTGCCGGTATAAAACACGCTGCTGACACTGTAGCAACCTGCAGCCCGCATGATAGAGCCT
|
|
| Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTQLQGLTITAALNIDTPFGAPSAPVLRGEYAGREVLFLARHGHPHRIPPHQVNYRANLWALKEAGAQAIVAVNAVGGIHMAMGTGHFC VPHQIIDYTSGREHTYFAGELEHVTHIDFSHPYDEALRSKLCQALAAERCEFSNHGVYGATQGPRLETMAEIARMERDGCDIVGMTGMPEAVLARELTLP YACLSLVVNPAAGKSNELITMAQIEQALVEGMDKVKAVLARVLSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|