Pseudomonas sp. S9, PSES9_RS0100075
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. S9 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGACTAAATTAATTGGCACAGGGTTTGCTTTGTTGCTTGCACAGAAAACTGCTTCGGCAAACGGCAAGGGCACAAACCATGAGTATCAGCTTCGCAAGCG CACTCGGCATTCACCAACAGGCACTGGGCTTTCGCGCTCAGCGTGCTGAAGTGTTGGCCAACAACATGGCTAACGCAGACACGCCTAACTACAAGGCCCG TGATCTGGATTTTGCCTCAGTGCTTGCCGAGCAGAATGCCAAGGCCCAGGGCGGTACCTTTGCCCTGAACCGCACCAATGCACACCATATCAGCGCTGAA GGCATGGCCACTGCAGAAGCCGAGCTCAAGTATCGCATCCCGATGAGCCCTTCGCTGGATCAGAACACGGTCGATACCCAGCTTGAGCAGTCCAATTACG CGCAAAACGCCGTCGACTTCCAGGCGAGCTTTACCCTACTCAATAGCAAGTTCAAAGGGCTGATCAGCGCCCTGCGCGGCGATTAACGGAGACTGATGCC
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| DNA Sequence for Gene |
>PSES9_RS0100075
ATGTCACTAGCCAGTGTATTCAATATTGCCGGGACCGGCATGAGCGCGCAAAGCACGCGCCTTAATACCATCTCCAGCAACATCGCCAACGCCGAGTCGG TTTCTTCGAACATTGACCAGACCTACCGCGCTCGCCACCCGGTGTTTGCCACCATGTTTAATCAGGCCCAGGGTTCTGACGGCGGTTCGCTGTTTGCCGA GCAGGATGCGGCAGGCAGCCGTGTCCACGTGCTGGGGATTGTTGAGGGCCAGAGCTCGCTGATGCCGCGCTATGAGCCTACCCACCCGGCTGCCGATGAA AACGGCTACGTCTATTACCCCAACGTCAATGTGGTCGAAGAGATGGCTGACATGATTTCCGCCAGCCGGGCTTTCCAGACCAACGTTGAAATGATGAATA CCGCTAAACAAATGTTGCAGAAGGTGCTGACCCTGGGTCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCATCAATGAGGAACGCTAAATGAGCGTCGATAGCACCAGTGGCGTTGGCAGTTCGGTCTTTGATCAACTGCAGATTAAATCGCCCAGCACCGGCACCG ACAAAGAACTGGGTAAAGACGAGTTCTTGAACCTGTTGGTCGCCCAATTGAACAACCAGAACCCGCTGGAGCCGCAAGGTAACGGCGAGTTCATCGCCCA GTTGGCGCAGTTCAGCCAGGTAGAAGGTATTCAGCAGTTGAACGGTAGTGTCGACACCTTGCTGTCGGGTTATCAGTCTTCGCAGGCCTTGCAGGCATCG TCGCTGGTTGGGCGCAAGGTGATTGTGCCGACCGACAGTGCGGTGGTTGATACCAGCGAAAGCTTCAAGGCCAGCCTGATTCTGCCGACCAGCAGCAGCA ACGTCTACGTCAATGTCAAAGACAGTGCGGGCTCGGTGGTTGGCCGGGTCAATCTGGGTGAGCAGGAAGCAGGCAACATCAGTTTTATCTGGGATGGCAA
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| Amino Acid Sequence |
>flagellar basal body rod protein FlgC
MSLASVFNIAGTGMSAQSTRLNTISSNIANAESVSSNIDQTYRARHPVFATMFNQAQGSDGGSLFAEQDAAGSRVHVLGIVEGQSSLMPRYEPTHPAADE NGYVYYPNVNVVEEMADMISASRAFQTNVEMMNTAKQMLQKVLTLGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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