Pseudomonas taeanensis MS-3, TMS3_RS0121520
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_09, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCGCGCAGGGTCGGCGCGTCATCATCCGCTTCAGGCGCCTGACTTTGCCGGTCCTTCCACCAGCGCTCCAGTGGCCAGCGGATGGCCACGAACAGCAG GTACAGGGCGAAGGCGATCATGCCGTACATGGCCAGGTCGGCCACGGCACGCCAGGCGTTGTTGCCCACTTTGAACAACATATCCAGGGCGGTAATGGCA ATCGCCGGGGCGAACAATTCCTTGGCCGGATCGACGATGGTCGGCGTGAACAACAGCACCGCCACCAGCACACGCAAGGGTTCGCGCAAATAACGCCACA TCCAGTTGGTCAAGCGCAACCAAACTAACAGGCAACCCAAAGCCGCAATGGCATAGGCGGCCCAGGCGAGTAGATAGTCGCTCTCGATCATAAAGCTGAT GAATTCCTGGCATGGCGGGGCTTACGAAGTGGGGCTTATGATAGCGGCTTTTCACCGGCCCGGCTCCCCCGCTGTCGGCCGCCCGCACTGGAGTTGCCGT
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| DNA Sequence for Gene |
>TMS3_RS0121520
ATGTCGCACGCCCCCACCGCCCGCACCGAGAGCGGCAACGACCCCTACCACTGGTTGGAGAATCGCGACAGCCAGGAGGTTCTCGAGTATCTCCAAGCTG AAAACGCCTACCTGGAGGCGCAACTTGCTGGGCAGCACGAGCTGCGTGAAACACTGTTCCAGGAGATCAAAAGTCGCATCCGCGAGACCGATCTATCGCT GCCCTCGCCGTGGGGGCCGTACCTGTATTACCAGCGCACCACTGCCGGCGACGAATACCCGCGGCACTACCGTTGCCCGCGCCCGATCGATGGCTCGCTC AGTGTCGATGAAGACGCCGAACAGTTGCTTCTCGACCCGAATATTCTCGCGGGCGACGGTTTCCTCTCGCTCGGAGCCTTTAGCATCAGTCCGGACCATC AGCGCCTGGCCTACAGCCTGGACACCAGTGGCGACGAGACCTACCAGCTATTTGTCAAAGAGCTGGCCAGCGACACCGTCAGCCAGCTGCCCTTCAGCGA CTGTGACGGCAGTATGACCTGGGCCAACGACAGTCAGACGCTGTTCTTCGGTGAGTTGGACGATACCCACCGCCCCCACATGCTGCATCGCCACCGCCTC GGCACGGACTCCGCCGAGCAGGTGTTCCATGAAGCCGACGGCCGCTTCTTCCTTAACTGCTATCGCGCCAGTTCCGAGCGCCAGTTGGTCCTGCTGCTGA GCAGCAAAACCACCAGCGAGGTCTGGGTGCTCGATGCCGACACGCCGAATGGCGCCTTCAGCTGTCTGGCGCCGCGTGAAGAAGGTCACGAATACTATGT CGATCACGGCAAACTCGACGGTGACTGGGCCTGGTTGATTCGCAGCAATCAACGCGGGATCAACTTCGCCCTGTTGTTTGTCAAGGAGAGTAGCGACAGC CAACAGCTTCCGACTCGCGAACACTGGCGCGAACTGCTCGCCCATAACGATCGAGTCATGCTCGAGGGCGTCAGCCTGAACAACAGCGCGCTGACCCTCA GCCTGCGCGAAGGCGGCCTGCCGATCATCGAGGTACGCGCCCACGGGCAAGCGAGCTACCGGGTGCAACTCCCGGATGCCGCCTACAGCCTGTACGTGCA AGACAGTCTGGAGTTCGACAGCAAGGAAATCCGCCTGCGCTATGAGGCGCTCAACCGCCCGGCCCAGATCCGCCAACTGACCCTGGCTAACGGCGCACAA CGGGTGCTCAAGGAAACGCCTGTCGAGGGCGAGTTCGACGCCGATGCCTATGTCAGCCAACGTCTATGGGCGACTGCTGCTGACGGCACCCAGGTGCCCA TCAGTCTGGTGGCCAAACGTGACGTGCTCGGTCATGCGGCGCCGCTTTACCTCTATGGCTATGGTGCCTACGGTGAAAGCCTGGACCCCTGGTTTTCCCA CGCTCGTCTGAGTTTGCTCGATCGCGGCTTCGTCTTCGCCATCGCCCATGTCCGCGGCGGTGGCGAACTGGGCGAAGCCTGGTACCGTGCCGGCAAACTG CAACACAAGAGCAACAGCTTCAACGACTTTATCGCCTGCGCCGAACACCTGATCGCCAGTGGTTACACCACGCCAAACCAGTTGGCCATCAGTGGCGGCA GCGCCGGGGGCCTGCTGATCGGCGCGGTGCTCAACATGCGCCCTGAGCTGTTCGCCGCGGCCGTGGCCGAAGTTCCGTTCGTCGACGTGCTCAACACCAT GCAGAACCCCGAGCTGCCCTTGACCGTGACCGAATACGACGAATGGGGCGACCCGCATGAGCCTGAGGTGTACCAGCGGATCAAAGGCTACGCGCCCTAC GAGAACATCAGCGCCCAGGCGTACCCGGCTCTGCTCGCTGTCGCTGGCTACAACGACAGTCGTGTGCAGTATTGGGAGGCGGCCAAGTGGGTGGCTAAAC TGCGATCCAACAAGACCGACGACAACCTGCTGCTGCTGAAAACCGACCTTGGCGCCGGCCATGGCGGCATGAGTGGGCGCTACCAGGCGTTGAAGGATGT GGCTTTGGAATACGCCTTTCTGCTCAAGGTACTCAAGCTACACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGTGACCTCACCCAGCGCGCTCAGAGGGTCTAACAAGTGATCGTTGGCAAGCTCGCCCCTAGTGGGTAAGGTCATACTCGGATCCGCCCACCTCTCAAC CGCCAAGCAGAAAACGATGCCAGATAGTTCTTACTTGATCGACGAAATCCGCGACATGCTGCTGGACTGTGGCCTGTTCAATAGTCTTTCGCCGAGCGAG GTGCTGAGCGTGGCGAGCTACTTCAACATCAGCCAGTTCAAGCCAGATGCAATCATCTGCAATGAAGGCGATGCGGGCAGCTTCATGTGCATTATTCATT TCGGCGCGGTGTCGGTCCGCAAGACCAACTCCAGCGGCGAACAGGTCGAACTCGCCAAGCTGCACAAGGGCCGCGCCTTCGGTGAAATGGCGGTACTGGA TGGCGAAAGACGCTCGGCAAGTTGCATTGCCGTCAGCGACTGCACCTTGCTGATGCTGGCCAAGGACTCGCTGGACAAGATGCTGCAAGAGGCACCGAAG
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| Amino Acid Sequence |
>peptidase S9
MSHAPTARTESGNDPYHWLENRDSQEVLEYLQAENAYLEAQLAGQHELRETLFQEIKSRIRETDLSLPSPWGPYLYYQRTTAGDEYPRHYRCPRPIDGSL SVDEDAEQLLLDPNILAGDGFLSLGAFSISPDHQRLAYSLDTSGDETYQLFVKELASDTVSQLPFSDCDGSMTWANDSQTLFFGELDDTHRPHMLHRHRL GTDSAEQVFHEADGRFFLNCYRASSERQLVLLLSSKTTSEVWVLDADTPNGAFSCLAPREEGHEYYVDHGKLDGDWAWLIRSNQRGINFALLFVKESSDS QQLPTREHWRELLAHNDRVMLEGVSLNNSALTLSLREGGLPIIEVRAHGQASYRVQLPDAAYSLYVQDSLEFDSKEIRLRYEALNRPAQIRQLTLANGAQ RVLKETPVEGEFDADAYVSQRLWATAADGTQVPISLVAKRDVLGHAAPLYLYGYGAYGESLDPWFSHARLSLLDRGFVFAIAHVRGGGELGEAWYRAGKL QHKSNSFNDFIACAEHLIASGYTTPNQLAISGGSAGGLLIGAVLNMRPELFAAAVAEVPFVDVLNTMQNPELPLTVTEYDEWGDPHEPEVYQRIKGYAPY ENISAQAYPALLAVAGYNDSRVQYWEAAKWVAKLRSNKTDDNLLLLKTDLGAGHGGMSGRYQALKDVALEYAFLLKVLKLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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